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path_2974_sm_supportinginformationTS1.pdf8KSupporting Information: Table S1. Summary of antibody clones, dilutions, antigen retrieval, and detection methods used.
path_2974_sm_supportinginformationTS2.pdf8KSupporting Information: Table S2. Summary of control group of 14 histological grade-matched invasive ductal carcinomas of no special type (IDC-NSTs) and 14 molecular subtype-matched triple-negative and basal-like IDC-NSTs analysed by microarray comparative genomic hybridization (aCGH).
path_2974_sm_supportinginformationTS3.pdf47KSupporting Information: Table S3. Results of chromogenic in situ hybridization of HER2, CCND1, EGFR, TOP2A, and FGFR1 in 13 breast adenoid cystic carcinomas.
path_2974_sm_supportinginformationTS4.pdf21KSupporting Information: Table S4. Summary of chromosomal regions of recurrent copy number changes in 14 breast adenoid cystic carcinomas (AdCCs) and the protein coding genes, microRNAs, and copy number variations mapping to these regions.
path_2974_sm_supportinginformationTS5.pdf19KSupporting Information: Table S5. Summary of chromosomal regions differentially gained or lost between 14 breast adenoid cystic carcinomas (AdCCs) and 14 histological grade-matched invasive ductal carcinomas of no special type (IDC-NSTs) and the protein coding genes, microRNAs, and copy number variations mapping to these regions.
path_2974_sm_supportinginformationTS6.pdf70KSupporting Information: Table S6. Summary of chromosomal regions differentially gained or lost between 14 breast adenoid cystic carcinomas (AdCCs) and 14 molecular subtype-matched basal-like invasive ductal carcinomas of no special type (IDC-NSTs) and the protein coding genes, microRNAs, and copy number variations mapping to these regions.
path_2974_sm_supportinginformationFS1.pdf95KSupporting Information: Figure S1. Mapping of bacterial artificial chromosome (BAC) clones used to construct the MYB and NFIB fusion and split-apart probes.
path_2974_sm_supportinginformationFS2.pdf416KSupporting Information: Figure S2. Detection of the MYB–NFIB fusion transcript in invasive ductal carcinomas of no special type (IDC-NSTs).
path_2974_sm_supportinginformationSuppl.doc136KSupporting Information: Details of statistical considerations, immunohistochemistry, DNA and RNA extraction, fluorescence in situ hybridization (FISH), RT-PCR and qRT-PCR, chromogenic in situ hybridization (CISH), and microarray comparative genomic hybridization (aCGH).
path_2974_sm_supportinginformFigLegends.doc21KSupporting Information: Legends to Figures S1 and S2

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