Report

Advances in the development of common interchange standards for proteomic data

  1. Sandra Orchard1,*,
  2. Chris F. Taylor1,
  3. Henning Hermjakob1,
  4. Weimin-Zhu1,
  5. Randall K. Julian Jr.2,
  6. Rolf Apweiler1

Article first published online: 5 JUL 2004

DOI: 10.1002/pmic.200400884

Issue

PROTEOMICS

PROTEOMICS

Special Issue: UNDERSTANDING BIOLOGICAL SYSTEMS THROUGH PROTEOMICS – SPS Proceedings 3rd Annual Congress, Basel, Switzerland 2–4 December 2003

Volume 4, Issue 8, pages 2363–2365, August 2004

Additional Information

How to Cite

Orchard, S., Taylor, C. F., Hermjakob, H., Weimin-Zhu, Julian, R. K. and Apweiler, R. (2004), Advances in the development of common interchange standards for proteomic data. Proteomics, 4: 2363–2365. doi: 10.1002/pmic.200400884

Author Information

  1. 1

    EMBL Outstation – European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK

  2. 2

    Lilly Research Laboratories, Indianapolis IN, USA

*EMBL Outstation, EBI, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK Fax: +44-1223-494-468

Publication History

  1. Issue published online: 20 JUL 2004
  2. Article first published online: 5 JUL 2004
  3. Manuscript Received: 17 MAY 2004

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Keywords:

  • Data standardisation;
  • Mass spectrometry;
  • Protein interaction

Abstract

The generation of proteomics data is increasingly high-throughput and high volume. Both experimental design and the technologies used to produce and subsequently analyze the data are becoming ever more complex. An increasing need for methods by which such data can be accurately described, stored and exchanged between experimenters and data repositories has been recognised. Work by the Proteomics Standards Initiative of the Human Proteome Organisation has laid the foundation for the development of standards by which experimental design can be described and data exchange facilitated. At a recent workshop in Nice, participants gathered to review the progress made to date and assist in pushing the process still further forward.

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