Report

Proteomics and Beyond A report on the 3rd Annual Spring Workshop of the HUPO-PSI 21–23 April 2006, San Francisco, CA, USA

  1. Sandra Orchard1,*,
  2. Rolf Apweiler1,
  3. Robert Barkovich2,
  4. Dawn Field3,
  5. John S. Garavelli1,
  6. David Horn4,
  7. Andy Jones5,
  8. Philip Jones1,
  9. Randall Julian6,
  10. Ruth McNally7,
  11. Jason Nerothin8,
  12. Norman Paton5,
  13. Angel Pizarro9,
  14. Sean Seymour10,
  15. Chris Taylor1,
  16. Stefan Wiemann11,
  17. Henning Hermjakob1

Article first published online: 8 AUG 2006

DOI: 10.1002/pmic.200600452

Issue

PROTEOMICS

PROTEOMICS

Volume 6, Issue 16, pages 4439–4443, No. 16 August 2006

Additional Information

How to Cite

Orchard, S., Apweiler, R., Barkovich, R., Field, D., Garavelli, J. S., Horn, D., Jones, A., Jones, P., Julian, R., McNally, R., Nerothin, J., Paton, N., Pizarro, A., Seymour, S., Taylor, C., Wiemann, S. and Hermjakob, H. (2006), Proteomics and Beyond A report on the 3rd Annual Spring Workshop of the HUPO-PSI 21–23 April 2006, San Francisco, CA, USA. Proteomics, 6: 4439–4443. doi: 10.1002/pmic.200600452

Author Information

  1. 1

    EMBL Outstation – European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, UK

  2. 2

    Thermo Electron Corp., Waltham, MA, USA

  3. 3

    Oxford Centre for Ecology and Hydrology, Oxford, UK

  4. 4

    Agilent Technologies, Palo Alto, CA, USA

  5. 5

    University of Manchester, Manchester, UK

  6. 6

    Indigo BioSystems, IN, USA

  7. 7

    ESRC CESAGen, Cardiff University, Cardiff, UK

  8. 8

    UCLA Molecular Biology Institute, Los Angeles, CA, USA

  9. 9

    University of Pennsylvania, Philadelphia, PA, USA

  10. 10

    Applied Biosystmes, Foster City, CA, USA

  11. 11

    German Cancer Research Centre, Heidelberg, Germany

*EBI, EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambs. CB10 1SD, UK Fax: +44-1223-494-468

Publication History

  1. Issue published online: 8 AUG 2006
  2. Article first published online: 8 AUG 2006
  3. Manuscript Received: 21 JUN 2006

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Keywords:

  • Data standardization;
  • Human Proteome Organisation;
  • Proteomics Standards Initiative

Abstract

The theme of the third annual Spring workshop of the HUPO-PSI was “proteomics and beyond” and its underlying goal was to reach beyond the boundaries of the proteomics community to interact with groups working on the similar issues of developing interchange standards and minimal reporting requirements. Significant developments in many of the HUPO-PSI XML interchange formats, minimal reporting requirements and accompanying controlled vocabularies were reported, with many of these now feeding into the broader efforts of the Functional Genomics Experiment (FuGE) data model and Functional Genomics Ontology (FuGO) ontologies.

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