PROTEOMICS

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Special Issue: From Genome to Proteome, Proceedings of the 5th Siena Meeting, Siena, Italy – September 2-5, 2002

June 2003

Volume 3, Issue 6

Pages 805–1093

Issue edited by: Michael J. Dunn

    1. Content: Proteomics 6/2003 (pages 805–812)

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200390084

    2. Editorial: Proteomics 6/2003 (page 813)

      Michael J. Dunn

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200390085

    3. Optimizing protein solubility for two-dimensional gel electrophoresis analysis of human myocardium (pages 815–820)

      Brian A. Stanley, Irina Neverova, Heather A. Brown and Jennifer E. Van Eyk

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200300388

    4. Soft immobilized pH gradient gels in proteome analysis: A follow-up (pages 821–825)

      Maurizio Bruschi, Luca Musante, Giovanni Candiano, Gian Marco Ghiggeri, Ben Herbert, Francesca Antonucci and Pier Giorgio Righetti

      Article first published online: 23 JUN 2003 | DOI: 10.1002/pmic.200300361

    5. β-elimination: An unexpected artefact in proteome analysis (pages 826–831)

      Ben Herbert, Femia Hopwood, David Oxley, John McCarthy, Matt Laver, J. Grinyer, A. Goodall, Keith Williams, Annalisa Castagna and Pier Giorgio Righetti

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200300414

    6. Shotgun collision-induced dissociation of peptides using a time of flight mass analyzer (pages 847–850)

      Samuel Purvine, Jason-Thomas Eppel*, Eugene C. Yi and David R. Goodlett

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200300362

    7. Unique scanning capabilities of a new hybrid linear ion trap mass spectrometer (Q TRAP) used for high sensitivity proteomics applications (pages 859–869)

      J. C. Yves Le Blanc, James W. Hager, A. M. Patricia Ilisiu, Christie Hunter, Feng Zhong and Ivan Chu

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200300415

    8. Popitam: Towards new heuristic strategies to improve protein identification from tandem mass spectrometry data (pages 870–878)

      Patricia Hernandez, Robin Gras, Julien Frey and Ron D. Appel

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200300402

    9. Using statistical image models for objective evaluation of spot detection in two-dimensional gels (pages 879–886)

      Mike Rogers, Jim Graham and Robert P. Tonge

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200300420

    10. Statistical models of shape for the analysis of protein spots in two-dimensional electrophoresis gel images (pages 887–896)

      Mike Rogers, Jim Graham and Robert P. Tonge

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200300421

    11. Structural proteome of human colostral fat globule membrane proteins (pages 897–905)

      Donatella Fortunato, Maria Gabriella Giuffrida, Maria Cavaletto, Lorenza Perono Garoffo, Giuseppina Dellavalle, Lorenzo Napolitano, Carlo Giunta, Claudio Fabris, Enrico Bertino, Alessandra Coscia and Amedeo Conti

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200300367

    12. Improved proteome analysis of Saccharomyces cerevisiae mitochondria by free-flow electrophoresis (pages 906–916)

      Hans Zischka, Gerhard Weber, Peter J. A. Weber, Anton Posch, Ralf J. Braun, Dietmute Bühringer, Ulrich Schneider, Mikkel Nissum, Thomas Meitinger, Marius Ueffing and Christoph Eckerskorn

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200300376

    13. Proteome analysis of dermal fibroblasts cultured in vitro from human healthy subjects of different ages (pages 917–929)

      Frederica Boraldi, Luca Bini, Sabrina Liberatori, Allessandro Armini, Vitaliano Pallini, Roberta Tiozzo, Ivonne Pasquali-Ronchetti and Daniela Quaglino

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200300386

    14. Epoetin alpha, epoetin beta and darbepoetin alfa: Two-dimensional gel electrophoresis isoforms characterization and mass spectrometry analysis (pages 937–941)

      Anna Caldini, Gloriano Moneti, Alessandra Fanelli, Alessia Bruschettini, Stefano Mercurio, Giuseppe Pieraccini, Elisabetta Cini, Agostino Ognibene, Francesca Luceri and Gianni Messeri

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200300405

    15. The effect of oxidation or alkylation on the separation of wool keratin proteins by two-dimensional gel electrophoresis (pages 942–950)

      Jeffrey E. Plowman, Leanne M. Flanagan, Louise N. Paton, Anna C. Fitzgerald, Nigel I. Joyce and Warren G. Bryson

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200300419

    16. Identification of new celiac disease autoantigens using proteomic analysis (pages 951–956)

      Jiří Stulík, Lenka Hernychová, Stanislava Porkertová, Oldřich Pozler, Ludmila Tučková, Daniel Sánchez and Jan Bureš

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200300370

    17. Human bronchoalveolar lavage: Biofluid analysis with special emphasis on sample preparation (pages 962–972)

      Amelie Plymoth, Claes-Göran Löfdahl, Ann Ekberg-Jansson, Magnus Dahlbäck, Henrik Lindberg, Thomas E. Fehniger and György Marko-Varga

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200300387

    18. Proteomic analysis of human vessels: Application to atherosclerotic plaques (pages 973–978)

      Mari Carmen Duran, Sebastian Mas, Jose Luis Martin-Ventura, Olivier Meilhac, Jean Baptiste Michel, Julio Gallego-Delgado, Alberto Lázaro, José Tuñon, Jesus Egido and Fernando Vivanco

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200300389

    19. Identification of markers for the selection of patients undergoing renal cell carcinoma-specific immunotherapy (pages 979–990)

      Barbara Seliger, Matthias Menig, Rudolf Lichtenfels, Derek Atkins, Jürgen Bukur, Thomas M. Halder, Michael Kersten, Alois Harder, Angelika Ackermann, Joachim Beck, Bernd Muehlenweg, Walburgis Brenner, Sebastian Melchior, Roland Kellner and Friedrich Lottspeich

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200300404

    20. Mapping of proteins in human saliva using two-dimensional gel electrophoresis and peptide mass fingerprinting (pages 1003–1015)

      Bijar Ghafouri, Christer Tagesson and Mats Lindahl

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200300426

    21. Analysis of rat testicular protein expression following 91-day exposure to JP-8 jet fuel vapor (pages 1016–1027)

      Frank A. Witzmann, Andrew Bobb, G. Bruce Briggs, Heather N. Coppage, Rex A. Hess, Junyu Li, Nathan M. Pedrick, Glenn D. Ritchie, John Rossi III and Kenneth R. Still

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200300385

    22. Proteomic analysis of a lymphoma-derived cell line (DG75) following treatment with a demethylating drug: Modification of membrane-associated proteins (pages 1028–1036)

      Florence Poirier, Raymonde Joubert-Caron, Valérie Labas and Michel Caron

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200300374

    23. You have free access to this content
      An approach to the proteomic analysis of a breast cancer cell line (SKBR-3) (pages 1037–1046)

      Shiaw-Lin Wu, William S. Hancock, Geoffrey G. Goodrich and Steven T. Kunitake

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200300382

    24. Proteomic analysis of changes in the extracellular matrix of Arabidopsis cell suspension cultures induced by fungal elicitors (pages 1047–1059)

      Bongani K. Ndimba, Stephen Chivasa, John M. Hamilton, William J. Simon and Antoni R. Slabas

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200300413

    25. Proteome analysis of Escherichia coli W3110 expressing an heterologous sigma factor (pages 1060–1065)

      Paola Baglioni, Luca Bini, Sabrina Liberatori, Vitaliano Pallini and Laura Marri

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200300403

    26. Proteomic changes in Escherichia coli TG1 after metabolic engineering for enhanced trichloroethene biodegradation (pages 1066–1069)

      Valerie A. Pferdeort, Thomas K. Wood and Kenneth F. Reardon

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200300418

    27. Membrane proteome of Acinetobacter radioresistens S13 during aromatic exposure (pages 1070–1076)

      Enrica Pessione, Maria Gabriella Giuffrida, Laura Prunotto, Cristina Barello, Roberto Mazzoli, Donatella Fortunato, Amedeo Conti and Carlo Giunta

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200300425

    28. Proteome analysis of aerobic and fermentative metabolism in Rhizobium etli CE3 (pages 1077–1085)

      Sergio Encarnación, Yudith Guzmán, Michael F. Dunn, Magdalena Hernández, Maria del Carmen Vargas and Jaime Mora

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200300427

    29. Book Review: Carbohydrate analysis by modern chromatography and electrophoresis. By Ziad El Rassi (pages 1086–1087)

      Fulvio Magni and Cecilia Sarto

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200390080

    30. Meetings Diary: Proteomics 6/2003 (pages 1088–1089)

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200390082

    31. New on the Market: Proteomics 6/2003 (pages 1090–1093)

      Article first published online: 16 JUN 2003 | DOI: 10.1002/pmic.200390083

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