PROTEOMICS

Cover image for Vol. 4 Issue 11

Special Issue: Disease Proteomics in Korea

No. 11 November 2004

Volume 4, Issue 11

Pages 3297–3661

Issue edited by: Young-Ki Paik

    1. Cover Picture: Proteomics 11/2004

      Version of Record online: 4 NOV 2004 | DOI: 10.1002/pmic.200490074

    2. Content: Proteomics 11/2004

      Version of Record online: 4 NOV 2004 | DOI: 10.1002/pmic.200490076

    3. Editorial: Disease Proteomics in Korea (pages 3297–3298)

      Young-Ki Paik

      Version of Record online: 4 NOV 2004 | DOI: 10.1002/pmic.200490071

    4. Antigens secreted from Mycobacterium tuberculosis: Identification by proteomics approach and test for diagnostic marker (pages 3299–3307)

      Young Yil Bahk, Suk Am Kim, Ji-Soo Kim, Hyung-Jin Euh, Gil-Han Bai, Sang-Nae Cho and Yu Sam Kim

      Version of Record online: 20 SEP 2004 | DOI: 10.1002/pmic.200400980

    5. Quantitative profiling of plasma peptides in asthmatic mice using liquid chromatography and mass spectrometry (pages 3308–3317)

      SinKoo Yeo, Gu Seob Roh, Dong-Hoon Kim, Jung Min Lee, Seong-Won Seo, Jin Won Cho, Chan-Wha Kim and KyuBum Kwack

      Version of Record online: 20 SEP 2004 | DOI: 10.1002/pmic.200400918

    6. Proteome analysis of differential protein expression in allergen-induced asthmatic mice lung after dexamethasone treatment (pages 3318–3327)

      Gu Seob Roh, YoungHyun Shin, Seong-Won Seo, Bo Ra Yoon, SinKoo Yeo, Sung Jin Park, Jin Won Cho and KyuBum Kwack

      Version of Record online: 20 SEP 2004 | DOI: 10.1002/pmic.200400930

    7. Restoration of heat shock protein70 suppresses gastric mucosal inducible nitric oxide synthase expression induced by Helicobacter pylori (pages 3335–3342)

      Marie Yeo, Hyun-kyung Park, Dong-Kyu Kim, Sung Won Cho, Young Suk Kim, Sang Yun Cho, Young-ki Paik and Ki-Baik Hahm

      Version of Record online: 20 SEP 2004 | DOI: 10.1002/pmic.200400951

    8. Proteomic analysis revealed a strong association of a high level of α1-antitrypsin in gastric juice with gastric cancer (pages 3343–3352)

      Kyunghee Lee, Minsu Kye, Joung Soon Jang, Ok Jae Lee, Taehyo Kim and Dongbin Lim

      Version of Record online: 20 SEP 2004 | DOI: 10.1002/pmic.200400960

    9. Identification of target proteins of N-acetylglucosaminyl-transferase V and fucosyltransferase 8 in human gastric tissues by glycomic approach (pages 3353–3358)

      Yong-Sam Kim, Soo Young Hwang, Sejeong Oh, Hosung Sohn, Hye-Yeon Kang, Jeong-Hwa Lee, Eun-Wie Cho, Jin-Young Kim, Jong Shin Yoo, Nam-Soon Kim, Cheorl-Ho Kim, Eiji Miyoshi, Naoyuki Taniguchi and Jeong Heon Ko

      Version of Record online: 4 NOV 2004 | DOI: 10.1002/pmic.200401026

    10. Profiling proteins related to amyloid deposited brain of Tg2576 mice (pages 3359–3368)

      Su Jeon Shin, Sung-Eun Lee, Jung Hyun Boo, Mihyang Kim, Young-Dae Yoon, Su-il Kim and Inhee Mook-Jung

      Version of Record online: 20 SEP 2004 | DOI: 10.1002/pmic.200400961

    11. A simple pattern classification method for alcohol-responsive proteins that are differentially expressed in mouse brain (pages 3369–3375)

      Bokyung Park, Seul-Ki Jeong, Won-Suk Lee, Je Kyung Seong and Young-Ki Paik

      Version of Record online: 24 SEP 2004 | DOI: 10.1002/pmic.200400958

    12. Analysis of proteome and transcriptome of tumor necrosis factor α stimulated vascular smooth muscle cells with or without alpha lipoic acid (pages 3383–3393)

      Won Gu Jang, Hye Soon Kim, Keun-Gyu Park, Yong Bok Park, Kun-Ho Yoon, Seong-Wook Han, Seung-Ho Hur, Kyong Soo Park and In-Kyu Lee

      Version of Record online: 20 SEP 2004 | DOI: 10.1002/pmic.200400972

    13. Proteomic analysis distinguishes basaloid carcinoma as a distinct subtype of nonsmall cell lung carcinoma (pages 3394–3400)

      Long Shan Li, Hyunki Kim, Hwanseok Rhee, Se Hoon Kim, Dong Hwan Shin, Kyung Young Chung, Kang-Sik Park, Young-Ki Paik, Joon Chang and Hoguen Kim

      Version of Record online: 20 SEP 2004 | DOI: 10.1002/pmic.200400901

    14. Identification of oxidized mitochondrial proteins in alcohol-exposed human hepatoma cells and mouse liver (pages 3401–3412)

      Soo-Kyung Suh, Brian L. Hood, Bong-Jo Kim, Thomas P. Conrads, Timothy D. Veenstra and Byoung J. Song

      Version of Record online: 24 SEP 2004 | DOI: 10.1002/pmic.200400971

    15. Differential expression profiling of the proteomes and their mRNAs in porcine white and red skeletal muscles (pages 3422–3428)

      Nam-Kuk Kim, Joong-Ho Joh, Hye-Ran Park, Oun-Hyun Kim, Beom-Young Park and Chang-Soo Lee

      Version of Record online: 24 SEP 2004 | DOI: 10.1002/pmic.200400976

    16. Identification of caspase-3 degradome by two-dimensional gel electrophoresis and matrix-assisted laser desorption/ionization-time of flight analysis (pages 3429–3436)

      Ah Young Lee, Byoung Chul Park, Mi Jang, Sayeon Cho, Do Hee Lee, Sang Chul Lee, Pyung Keun Myung and Sung Goo Park

      Version of Record online: 5 OCT 2004 | DOI: 10.1002/pmic.200400979

    17. Identification of the degradome of Isp-1, a major intracellular serine protease of Bacillus subtilis, by two-dimensional gel electrophoresis and matrix- assisted laser desorption/ionization-time of flight analysis (pages 3437–3445)

      Ah Young Lee, Sung Goo Park, Chang Won Kho, Sun Young Park, Sayeon Cho, Sang Chul Lee, Do Hee Lee, Pyung Keun Myung and Byoung Chul Park

      Version of Record online: 4 NOV 2004 | DOI: 10.1002/pmic.200400997

    18. Towards a proteomic analysis of atopic dermatitis: A two-dimensional-polyacrylamide gel electrophoresis/mass spectrometric analysis of cultured patient-derived fibroblasts (pages 3446–3455)

      Yong-Doo Park, So-yeon Kim, Hee-Sun Jang, Eun-Young Seo, Jung-Hyun Namkung, Hyung-Seok Park, Sang Yun Cho, Young-Ki Paik and Jun-Mo Yang

      Version of Record online: 5 OCT 2004 | DOI: 10.1002/pmic.200400998

    19. Identification of B-cell translocation gene 1 as a biomarker for monitoring the remission of acute myeloid leukemia (pages 3456–3463)

      Jae-We Cho, Jeong Jung Kim, Sung Goo Park, Do Hee Lee, Sang Chul Lee, Hyeoung-Joon Kim, Byoung Chul Park and Sayeon Cho

      Version of Record online: 24 SEP 2004 | DOI: 10.1002/pmic.200400968

    20. Multiplexed fluorescence detection of phosphorylation, glycosylation, and total protein in the proteomic analysis of breast cancer refractoriness (pages 3464–3467)

      Yue Ge, Lakshmanswamy Rajkumar, Raphael C. Guzman, Satyabrata Nandi, Wayne F. Patton and Brian J. Agnew

      Version of Record online: 20 SEP 2004 | DOI: 10.1002/pmic.200400957

    21. Analysis of protein interactions on protein arrays by a wavelength interrogation-based surface plasmon resonance biosensor (pages 3468–3476)

      Jong Seol Yuk, Se-Hui Jung, Jae-Wan Jung, Duk-Geun Hong, Jeong-A Han, Young-Myeong Kim and Kwon-Soo Ha

      Version of Record online: 27 AUG 2004 | DOI: 10.1002/pmic.200400879

    22. The use of proteomics in the discovery of serum biomarkers from patients with severe acute respiratory syndrome (pages 3477–3484)

      Yi Ren, Qing-Yu He, Jianqing Fan, Brian Jones, Yuan Zhou, Yi Xie, Chung-Yan Cheung, Adrian Wu, Jen-Fu Chiu, J. S. Malik Peiris and Paul Kwong Hang Tam

      Version of Record online: 2 SEP 2004 | DOI: 10.1002/pmic.200400897

    23. Establishment of a near-standard two-dimensional human urine proteomic map (pages 3485–3497)

      Jisun Oh, Jae-Hoon Pyo, Eun-Hyun Jo, Sun-Il Hwang, Sun-Chul Kang, Jae-Hwan Jung, Eui-Kyun Park, Shin-Yoon Kim, Je-Yong Choi and Jinkyu Lim

      Version of Record online: 4 NOV 2004 | DOI: 10.1002/pmic.200401018

    24. Differential expression of proteins in rat plasma exposed to benzene (pages 3498–3504)

      Hyun-Ju Lee, Do-Youn Lee, Won-A Joo, Donggeun Sul, Eunil Lee and Chan-Wha Kim

      Version of Record online: 5 OCT 2004 | DOI: 10.1002/pmic.200400996

    25. Protein biomarkers in the plasma of workers occupationally exposed to polycyclic aromatic hydrocarbons (pages 3505–3513)

      Noh Kap-Soon, Lee Do-Youn, Cha Jung Hak, Won-A Joo, Eunil Lee and Kim Chan-Wha

      Version of Record online: 5 OCT 2004 | DOI: 10.1002/pmic.200400964

    26. Effects of benzo(a)pyrene on protein expression in Jurkat T-cells (pages 3514–3526)

      Sangnam Oh, Hosub Im, Eunha Oh, Joohyun Lee, Jin-young Khim, Joohee Mun, Yanghee Kim, Eunil Lee, Joon Kim and Donggeun Sul

      Version of Record online: 4 NOV 2004 | DOI: 10.1002/pmic.200400981

    27. Two-dimensional electrophoretic analysis reveals that lipid rafts are intact at physiological temperature (pages 3527–3535)

      Ki-Bum Kim, Sang-Il Kim, Hyo-Jung Choo, Ji-Hyun Kim and Young-Gyu Ko

      Version of Record online: 4 NOV 2004 | DOI: 10.1002/pmic.200401001

    28. Lipid raft proteome reveals ATP synthase complex in the cell surface (pages 3536–3548)

      Tae-Jung Bae, Min-Sik Kim, Jun-Woo Kim, Bong-Woo Kim, Hyo-Jung Choo, Joong-Won Lee, Ki-Bum Kim, Chang Seok Lee, Ji-Hyun Kim, Sun Young Chang, Chang-Yuil Kang, Sang-Won Lee and Young-Gyu Ko

      Version of Record online: 20 SEP 2004 | DOI: 10.1002/pmic.200400952

    29. Proteomic analysis of the response of Arabidopsis chloroplast proteins to high light stress (pages 3560–3568)

      Bong-Kwan Phee, Jin-Hwan Cho, Sebyul Park, Jin Hee Jung, Youn-Hyung Lee, Jong-Seong Jeon, Seong Hee Bhoo and Tae-Ryong Hahn

      Version of Record online: 11 OCT 2004 | DOI: 10.1002/pmic.200400982

    30. Proteomic analysis of pathogen-responsive proteins from rice leaves induced by rice blast fungus, Magnaporthe grisea (pages 3569–3578)

      Sun Tae Kim, Sang Gon Kim, Du Hyeon Hwang, Sun Young Kang, Han Ju Kim, Byung Hyun Lee, Jeung Joo Lee and Kyu Young Kang

      Version of Record online: 11 OCT 2004 | DOI: 10.1002/pmic.200400999

    31. Proteome analysis of rice blast fungus (Magnaporthe grisea) proteome during appressorium formation (pages 3579–3587)

      Sun Tae Kim, Seok Yu, Sang Gon Kim, Han Ju Kim, Sun Young Kang, Du Hyeon Hwang, Yu Sin Jang and Kyu Young Kang

      Version of Record online: 20 SEP 2004 | DOI: 10.1002/pmic.200400969

    32. Strategic proteome analysis of Candida magnoliae with an unsequenced genome (pages 3588–3599)

      Hyo-Jin Kim, Do-Yup Lee, Dae-Hee Lee, Yong-Cheol Park, Dae-Hyuk Kweon, Yeon-Woo Ryu and Jin-Ho Seo

      Version of Record online: 20 SEP 2004 | DOI: 10.1002/pmic.200400966

    33. Identification of antigenic proteins from Neospora caninum recognized by bovine immunoglobulins M, E, A and G using immunoproteomics (pages 3600–3609)

      Yong-seung Shin, Eung-goo Lee, Gee-wook Shin, Young-rim Kim, Eun-young Lee, Jae-hoon Kim, Hwan Jang, Laurel J. Gershwin, Dae-yong Kim, Yong-hwan Kim, Gon-sup Kim, Myung-deuk Suh and Tae-sung Jung

      Version of Record online: 24 SEP 2004 | DOI: 10.1002/pmic.200400963

    34. Proteome analysis of Pseudomonas sp. K82 biodegradation pathways (pages 3610–3621)

      Seung Il Kim, Jin Young Kim, Sung-Ho Yun, Jung-Hyun Kim, Sun-Hee Leem and Chulhyun Lee

      Version of Record online: 24 SEP 2004 | DOI: 10.1002/pmic.200400977

    35. Identification and characterization of inosine monophosphate dehydrogenase from Halobacterium salinarum (pages 3632–3641)

      Soo-Jin Park, Won-A Joo, Jiyeon Choi, So-Hee Lee and Chan-Wha Kim

      Version of Record online: 5 OCT 2004 | DOI: 10.1002/pmic.200400921

    36. Proteome analysis of red deer antlers (pages 3642–3653)

      Hee Jin Park, Do Hee Lee, Sung Goo Park, Sang Chul Lee, Sayeon Cho, Ha Kun Kim, Jae Jong Kim, Hyunsu Bae and Byoung Chul Park

      Version of Record online: 4 NOV 2004 | DOI: 10.1002/pmic.200401027

    37. Psychrophilicity of Bacillus psychrosaccharolyticus: A proteomic study (pages 3654–3659)

      Jong Bok Seo, Hye Sook Kim, Gyoo Yeol Jung, Myung Hee Nam, Joo Hee Chung, Jin Young Kim, Jong Shin Yoo, Chan Wha Kim and Ohoak Kwon

      Version of Record online: 4 NOV 2004 | DOI: 10.1002/pmic.200401025

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    39. Meetings Diary: Proteomics 11/2004 (page 3660)

      Version of Record online: 4 NOV 2004 | DOI: 10.1002/pmic.200490075

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