PROTEOMICS

Cover image for Vol. 4 Issue 6

Special Issue: PROTEIN MODIFICATION DATABASES AND PREDICTIONS

June 2004

Volume 4, Issue 6

Pages 1525–1853

Issue edited by: Ron D. Appel, Amos Bairoch

    1. Cover Picture: Proteomics 6/2004

      Version of Record online: 25 MAY 2004 | DOI: 10.1002/pmic.200490036

    2. Content: Proteomics 6/2004

      Version of Record online: 25 MAY 2004 | DOI: 10.1002/pmic.200490038

    3. Unimod: Protein modifications for mass spectrometry (pages 1534–1536)

      David M. Creasy and John S. Cottrell

      Version of Record online: 5 APR 2004 | DOI: 10.1002/pmic.200300744

    4. Annotation of post-translational modifications in the Swiss-Prot knowledge base (pages 1537–1550)

      Nathalie Farriol-Mathis, John S. Garavelli, Brigitte Boeckmann, Séverine Duvaud, Elisabeth Gasteiger, Alain Gateau, Anne-Lise Veuthey and Amos Bairoch

      Version of Record online: 22 APR 2004 | DOI: 10.1002/pmic.200300764

    5. PhosphoSite: A bioinformatics resource dedicated to physiological protein phosphorylation (pages 1551–1561)

      Peter V. Hornbeck, Indy Chabra, Jon M. Kornhauser, Elzbieta Skrzypek and Bin Zhang

      Version of Record online: 3 MAY 2004 | DOI: 10.1002/pmic.200300772

    6. Advances in the prediction of protein targeting signals (pages 1571–1580)

      Gisbert Schneider and Uli Fechner

      Version of Record online: 30 APR 2004 | DOI: 10.1002/pmic.200300786

    7. Predotar: A tool for rapidly screening proteomes for N-terminal targeting sequences (pages 1581–1590)

      Ian Small, Nemo Peeters, Fabrice Legeai and Claire Lurin

      Version of Record online: 30 APR 2004 | DOI: 10.1002/pmic.200300776

    8. Prediction of sequence signals for lipid post-translational modifications: Insights from case studies (pages 1614–1625)

      Birgit Eisenhaber, Frank Eisenhaber, Sebastian Maurer-Stroh and Georg Neuberger

      Version of Record online: 30 APR 2004 | DOI: 10.1002/pmic.200300781

    9. N-Terminal myristoylation predictions by ensembles of neural networks (pages 1626–1632)

      Guido Bologna, Cédric Yvon, Séverine Duvaud and Anne-Lise Veuthey

      Version of Record online: 22 APR 2004 | DOI: 10.1002/pmic.200300783

    10. Prediction of post-translational glycosylation and phosphorylation of proteins from the amino acid sequence (pages 1633–1649)

      Nikolaj Blom, Thomas Sicheritz-Pontén, Ramneek Gupta, Steen Gammeltoft and Søren Brunak

      Version of Record online: 3 MAY 2004 | DOI: 10.1002/pmic.200300771

    11. Development of a mass fingerprinting tool for automated interpretation of oligosaccharide fragmentation data (pages 1650–1664)

      Hiren J. Joshi, Mathew J. Harrison, Benjamin L. Schulz, Catherine A. Cooper, Nicolle H. Packer and Niclas G. Karlsson

      Version of Record online: 3 MAY 2004 | DOI: 10.1002/pmic.200300784

    12. Prediction of disulfide-bonded cysteines in proteomes with a hidden neural network (pages 1665–1671)

      Pier Luigi Martelli, Piero Fariselli and Rita Casadio

      Version of Record online: 30 APR 2004 | DOI: 10.1002/pmic.200300745

    13. ProteoMod: A new tool to quantitate protein post-translational modifications (pages 1672–1683)

      Yadunanda Kumar, Amit Khachane, Mukta Belwal, Sanjeev Das, Kumar Somsundaram and Utpal Tatu

      Version of Record online: 3 MAY 2004 | DOI: 10.1002/pmic.200300778

    14. Functional protein nanoarrays for biomarker profiling (pages 1695–1702)

      Michael Lynch, Curtis Mosher, Janice Huff, Saju Nettikadan, James Johnson and Eric Henderson

      Version of Record online: 20 APR 2004 | DOI: 10.1002/pmic.200300701

    15. Readout of protein microarrays using intrinsic time resolved UV fluorescence for label-free detection (pages 1703–1711)

      Hans-Martin Striebel, Peter Schellenberg, Paulius Grigaravicius and Karl Otto Greulich

      Version of Record online: 20 APR 2004 | DOI: 10.1002/pmic.200300705

    16. Modulation of gene expression by hypoxia in human umbilical cord vein endothelial cells: A transcriptomic and proteomic study (pages 1737–1760)

      Simone B. Scheurer, Jascha N. Raybak, Christoph Rösli, Dario Neri and Giuliano Elia

      Version of Record online: 20 APR 2004 | DOI: 10.1002/pmic.200300689

    17. Two-dimensional maps and databases of the human macrophage proteome and secretome (pages 1761–1778)

      Annabelle Dupont, Caroline Tokarski, Olivia Dekeyzer, Anne-Laure Guihot, Philippe Amouyel, Christian Rolando and Florence Pinet

      Version of Record online: 5 APR 2004 | DOI: 10.1002/pmic.200300691

    18. Cross-species identification of proteins from proteome profiles of the marine oligotrophic ultramicrobacterium, Sphingopyxis alaskensis (pages 1779–1788)

      Martin Ostrowski, Fitri Fegatella, Valerie Wasinger, Michael Guilhaus, Garry L. Corthals and Ricardo Cavicchioli

      Version of Record online: 20 APR 2004 | DOI: 10.1002/pmic.200300695

    19. Characterization and location of post-translational modifications on chromogranin B from bovine adrenal medullary chromaffin granules (pages 1789–1801)

      Claire Gasnier, Karine Lugardon, Olivier Ruh, Jean-Marc Strub, Dominique Aunis and Marie-Hélène Metz-Boutigue

      Version of Record online: 22 APR 2004 | DOI: 10.1002/pmic.200300693

    20. Proteomic analysis of mouse mammary terminal end buds identifies axonal growth cone proteins (pages 1802–1810)

      Joanna S. Morris, Claire R. Davies, Matthew R. Griffiths, Martin J. Page, James A. Bruce, Thakor Patel, Athula Herath and Barry A. Gusterson

      Version of Record online: 20 APR 2004 | DOI: 10.1002/pmic.200300699

    21. Proteomic characterization of novel serum amyloid P component variants from human plasma and urine (pages 1825–1829)

      Urban A. Kiernan, Dobrin Nedelkov, Kemmons A. Tubbs, Eric E. Niederkofler and Randball W. Nelson

      Version of Record online: 20 APR 2004 | DOI: 10.1002/pmic.200300690

    22. Dispensable role for interferon-γ in the burn-induced acute phase response: A proteomic analysis (pages 1830–1839)

      Xunbao Duan, David M. Yarmush, Arul Jayaraman and Martin L. Yarmush

      Version of Record online: 5 APR 2004 | DOI: 10.1002/pmic.200300696

    23. Proteomic analysis of adipocyte differentiation: Evidence that α2 macroglobulin is involved in the adipose conversion of 3T3 L1 preadipocytes (pages 1840–1848)

      Kai-Luk Choi, Yu Wang, Cynthia A. Tse, Karen S. L. Lam, Garth J. S. Cooper and Aimin Xu

      Version of Record online: 20 APR 2004 | DOI: 10.1002/pmic.200300697

    24. You have free access to this content
      Proteomic determination of metabolic enzymes of the amnion cell: Basis for a possible diagnostic tool? (vol. 4, issue 4, pp. 1145-1158) (page 1849)

      Ji-eun Oh, Michael Fountoulakis, Jean-François Juranville, Margit Rosner, Markus Hengstschlaeger and Gert Lubec

      Version of Record online: 25 MAY 2004 | DOI: 10.1002/pmic.200490034

    25. Meetings: Proteomics 6/2004 (page 1849)

      Version of Record online: 25 MAY 2004 | DOI: 10.1002/pmic.200490037

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