PROTEOMICS

Cover image for Vol. 8 Issue 14

No. 14 July 2008

Volume 8, Issue 14

Pages 2774–2992

  1. Cover Picture

    1. Top of page
    2. Cover Picture
    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. Editorial
    7. Technology
    8. Bioinformatics
    9. Protein Arrays
    10. Glycoproteomics
    11. Cell Biology
    12. Microbiology
    13. Plant Proteomics
    14. Animal Proteomics
    1. Cover Picture: Proteomics 14/2008

      Article first published online: 23 JUL 2008 | DOI: 10.1002/pmic.200890050

  2. In this issue

    1. Top of page
    2. Cover Picture
    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. Editorial
    7. Technology
    8. Bioinformatics
    9. Protein Arrays
    10. Glycoproteomics
    11. Cell Biology
    12. Microbiology
    13. Plant Proteomics
    14. Animal Proteomics
    1. In this issue: Proteomics 14/2008

      Article first published online: 23 JUL 2008 | DOI: 10.1002/pmic.200890051

  3. Contents

    1. Top of page
    2. Cover Picture
    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. Editorial
    7. Technology
    8. Bioinformatics
    9. Protein Arrays
    10. Glycoproteomics
    11. Cell Biology
    12. Microbiology
    13. Plant Proteomics
    14. Animal Proteomics
    1. Contents: Proteomics 14/2008

      Article first published online: 23 JUL 2008 | DOI: 10.1002/pmic.200890052

  4. From Our Sister Journal

    1. Top of page
    2. Cover Picture
    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. Editorial
    7. Technology
    8. Bioinformatics
    9. Protein Arrays
    10. Glycoproteomics
    11. Cell Biology
    12. Microbiology
    13. Plant Proteomics
    14. Animal Proteomics
    1. From Our Sister Journal: Proteomics 14/2008 (pages 2774–2775)

      Article first published online: 23 JUL 2008 | DOI: 10.1002/pmic.200890048

  5. Editorial

    1. Top of page
    2. Cover Picture
    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. Editorial
    7. Technology
    8. Bioinformatics
    9. Protein Arrays
    10. Glycoproteomics
    11. Cell Biology
    12. Microbiology
    13. Plant Proteomics
    14. Animal Proteomics
  6. Technology

    1. Top of page
    2. Cover Picture
    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. Editorial
    7. Technology
    8. Bioinformatics
    9. Protein Arrays
    10. Glycoproteomics
    11. Cell Biology
    12. Microbiology
    13. Plant Proteomics
    14. Animal Proteomics
    1. Increasing information from shotgun proteomic data by accounting for misassigned precursor ion masses (pages 2791–2797)

      Alexander Scherl, Yihsuan Shannon Tsai, Scott A. Shaffer and David R. Goodlett

      Article first published online: 23 JUL 2008 | DOI: 10.1002/pmic.200800045

    2. Free-flow electrophoresis for top-down proteomics by Fourier transform ion cyclotron resonance mass spectrometry (pages 2798–2808)

      Séverine A. Ouvry-Patat, Matthew P. Torres, Hung-Hiang Quek, Craig A. Gelfand, Patrick O'Mullan, Mikkel Nissum, Gottfried K. Schroeder, Jun Han, Monica Elliott, Deanna Dryhurst, Juan Ausio, Richard Wolfenden and Christoph H. Borchers

      Article first published online: 23 JUL 2008 | DOI: 10.1002/pmic.200800079

  7. Bioinformatics

    1. Top of page
    2. Cover Picture
    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. Editorial
    7. Technology
    8. Bioinformatics
    9. Protein Arrays
    10. Glycoproteomics
    11. Cell Biology
    12. Microbiology
    13. Plant Proteomics
    14. Animal Proteomics
    1. Extent of N-terminal modifications in cytosolic proteins from eukaryotes (pages 2809–2831)

      Aude Martinez, José A. Traverso, Benoît Valot, Myriam Ferro, Christelle Espagne, Geneviève Ephritikhine, Michel Zivy, Carmela Giglione and Thierry Meinnel

      Article first published online: 23 JUL 2008 | DOI: 10.1002/pmic.200701191

    2. A whole-genome bioinformatics approach to selection of antigens for systematic antibody generation (pages 2832–2839)

      Lisa Berglund, Erik Björling, Kalle Jonasson, Johan Rockberg, Linn Fagerberg, Cristina Al-Khalili Szigyarto, Åsa Sivertsson and Mathias Uhlén

      Article first published online: 23 JUL 2008 | DOI: 10.1002/pmic.200800203

  8. Protein Arrays

    1. Top of page
    2. Cover Picture
    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. Editorial
    7. Technology
    8. Bioinformatics
    9. Protein Arrays
    10. Glycoproteomics
    11. Cell Biology
    12. Microbiology
    13. Plant Proteomics
    14. Animal Proteomics
    1. Two-dimensional immune profiles improve antigen microarray-based characterization of humoral immunity (pages 2840–2848)

      Krisztián Papp, Zsuzsanna Szekeres, Anna Erdei and József Prechl

      Article first published online: 23 JUL 2008 | DOI: 10.1002/pmic.200800014

  9. Glycoproteomics

    1. Top of page
    2. Cover Picture
    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. Editorial
    7. Technology
    8. Bioinformatics
    9. Protein Arrays
    10. Glycoproteomics
    11. Cell Biology
    12. Microbiology
    13. Plant Proteomics
    14. Animal Proteomics
    1. O-acetylation of sialic acids in N-glycans of Atlantic salmon (Salmo salar) serum is altered by handling stress (pages 2849–2857)

      Xin Liu, Luis Afonso, Eleonora Altman, Stewart Johnson, Laura Brown and Jianjun Li

      Article first published online: 23 JUL 2008 | DOI: 10.1002/pmic.200701093

    2. Analysis of immunoglobulin glycosylation by LC-ESI-MS of glycopeptides and oligosaccharides (pages 2858–2871)

      Johannes Stadlmann, Martin Pabst, Daniel Kolarich, Renate Kunert and Friedrich Altmann

      Article first published online: 23 JUL 2008 | DOI: 10.1002/pmic.200700968

  10. Cell Biology

    1. Top of page
    2. Cover Picture
    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. Editorial
    7. Technology
    8. Bioinformatics
    9. Protein Arrays
    10. Glycoproteomics
    11. Cell Biology
    12. Microbiology
    13. Plant Proteomics
    14. Animal Proteomics
    1. Profiling the proteome dynamics during the cell cycle of human hepatoma cells (pages 2872–2884)

      Sen-Yung Hsieh, Feng-Hui Zhuang, Yi-Ting Wu, Jen-Kun Chen and Yun-Lin Lee

      Article first published online: 23 JUL 2008 | DOI: 10.1002/pmic.200800196

    2. Proteomic analysis of ubiquitinated proteins in normal hepatocyte cell line Chang liver cells (pages 2885–2896)

      Fengwei Tan, Lifang Lu, Yun Cai, Jinglan Wang, Yunfei Xie, Lin Wang, Yanhua Gong, Bing-e Xu, Jun Wu, Ying Luo, Boqin Qiang, Jiangang Yuan, Xiaoqing Sun and Xiaozhong Peng

      Article first published online: 23 JUL 2008 | DOI: 10.1002/pmic.200700887

    3. Proteomic analysis of hypoxia-induced tube breakdown of an in vitro capillary model composed of HUVECs: Potential role of p38-regulated reduction of HSP27 (pages 2897–2906)

      Ryoji Eguchi, Hirotaka Naitou, Kazuhiro Kunimasa, Rie Ayuzawa, Yoshihiro Fujimori, Norio Ohashi, Kazuhiko Kaji and Toshiro Ohta

      Article first published online: 23 JUL 2008 | DOI: 10.1002/pmic.200800055

    4. Proteomic identification of a PSF/p54nrb heterodimer as RNF43 oncoprotein-interacting proteins (pages 2907–2910)

      Kentaro Miyamoto, Hidetaka Sakurai and Takeyuki Sugiura

      Article first published online: 23 JUL 2008 | DOI: 10.1002/pmic.200800083

    5. 2-D DIGE analyses of enriched secretory lysosomes reveal heterogeneous profiles of functionally relevant proteins in leukemic and activated human NK cells (pages 2911–2925)

      Hendrik Schmidt, Christoph Gelhaus, Melanie Nebendahl, Marcus Lettau, Carsten Watzl, Dieter Kabelitz, Matthias Leippe and Ottmar Janssen

      Article first published online: 23 JUL 2008 | DOI: 10.1002/pmic.200800170

    6. Cleavage and functional loss of human apolipoprotein E by digestion of matrix metalloproteinase-14 (pages 2926–2935)

      Jun Hyoung Park, Sung-Min Park, Sun-Hyun Park, Kyung-Hyun Cho and Seung-Taek Lee

      Article first published online: 23 JUL 2008 | DOI: 10.1002/pmic.200700487

  11. Microbiology

    1. Top of page
    2. Cover Picture
    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. Editorial
    7. Technology
    8. Bioinformatics
    9. Protein Arrays
    10. Glycoproteomics
    11. Cell Biology
    12. Microbiology
    13. Plant Proteomics
    14. Animal Proteomics
    1. Candida albicans biofilm formation is associated with increased anti-oxidative capacities (pages 2936–2947)

      C. Jayampath Seneviratne, Yu Wang, Lijian Jin, Yoshi Abiko and Lakshman P. Samaranayake

      Article first published online: 23 JUL 2008 | DOI: 10.1002/pmic.200701097

  12. Plant Proteomics

    1. Top of page
    2. Cover Picture
    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. Editorial
    7. Technology
    8. Bioinformatics
    9. Protein Arrays
    10. Glycoproteomics
    11. Cell Biology
    12. Microbiology
    13. Plant Proteomics
    14. Animal Proteomics
    1. Comparative proteomic and transcriptional profiling of a bread wheat cultivar and its derived transgenic line overexpressing a low molecular weight glutenin subunit gene in the endosperm (pages 2948–2966)

      Federico Scossa, Debbie Laudencia-Chingcuanco, Olin D. Anderson, William H. Vensel, Domenico Lafiandra, Renato D'Ovidio and Stefania Masci

      Article first published online: 23 JUL 2008 | DOI: 10.1002/pmic.200700861

  13. Animal Proteomics

    1. Top of page
    2. Cover Picture
    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. Editorial
    7. Technology
    8. Bioinformatics
    9. Protein Arrays
    10. Glycoproteomics
    11. Cell Biology
    12. Microbiology
    13. Plant Proteomics
    14. Animal Proteomics
    1. Differential proteomic analysis of bovine conceptus fluid proteins in pregnancies generated by assisted reproductive technologies (pages 2967–2982)

      George A. Riding, Jonathan R. Hill, Alun Jones, Michael K. Holland, Peter F. Josh and Sigrid A. Lehnert

      Article first published online: 23 JUL 2008 | DOI: 10.1002/pmic.200800008

    2. Inhaled anesthetics elicit region-specific changes in protein expression in mammalian brain (pages 2983–2992)

      Jonathan Z. Pan, Jin Xi, Maryellen F. Eckenhoff and Roderic G. Eckenhoff

      Article first published online: 23 JUL 2008 | DOI: 10.1002/pmic.200800057

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