PROTEOMICS

Cover image for Vol. 8 Issue 22

No. 22 November 2008

Volume 8, Issue 22

Pages 4614–4833

  1. Cover Picture

    1. Top of page
    2. Cover Picture
    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. HUPO Highlights
    7. Viewpoint
    8. Technology
    9. Nanoproteomics
    10. Bioinformatics
    11. Systems Biology
    12. Protein Arrays
    13. Cell Biology
    14. Microbiology
    15. Plant Proteomics
    16. Animal Proteomics
    17. Errata
    1. Cover Picture: Proteomics 22/2008

      Version of Record online: 7 NOV 2008 | DOI: 10.1002/pmic.200890082

  2. In this issue

    1. Top of page
    2. Cover Picture
    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. HUPO Highlights
    7. Viewpoint
    8. Technology
    9. Nanoproteomics
    10. Bioinformatics
    11. Systems Biology
    12. Protein Arrays
    13. Cell Biology
    14. Microbiology
    15. Plant Proteomics
    16. Animal Proteomics
    17. Errata
    1. In this issue: Proteomics 22/2008

      Version of Record online: 7 NOV 2008 | DOI: 10.1002/pmic.200890084

  3. Contents

    1. Top of page
    2. Cover Picture
    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. HUPO Highlights
    7. Viewpoint
    8. Technology
    9. Nanoproteomics
    10. Bioinformatics
    11. Systems Biology
    12. Protein Arrays
    13. Cell Biology
    14. Microbiology
    15. Plant Proteomics
    16. Animal Proteomics
    17. Errata
    1. Contents: Proteomics 22/2008

      Version of Record online: 7 NOV 2008 | DOI: 10.1002/pmic.200890085

  4. From Our Sister Journal

    1. Top of page
    2. Cover Picture
    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. HUPO Highlights
    7. Viewpoint
    8. Technology
    9. Nanoproteomics
    10. Bioinformatics
    11. Systems Biology
    12. Protein Arrays
    13. Cell Biology
    14. Microbiology
    15. Plant Proteomics
    16. Animal Proteomics
    17. Errata
  5. HUPO Highlights

    1. Top of page
    2. Cover Picture
    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. HUPO Highlights
    7. Viewpoint
    8. Technology
    9. Nanoproteomics
    10. Bioinformatics
    11. Systems Biology
    12. Protein Arrays
    13. Cell Biology
    14. Microbiology
    15. Plant Proteomics
    16. Animal Proteomics
    17. Errata
  6. Viewpoint

    1. Top of page
    2. Cover Picture
    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. HUPO Highlights
    7. Viewpoint
    8. Technology
    9. Nanoproteomics
    10. Bioinformatics
    11. Systems Biology
    12. Protein Arrays
    13. Cell Biology
    14. Microbiology
    15. Plant Proteomics
    16. Animal Proteomics
    17. Errata
    1. You have free access to this content
  7. Technology

    1. Top of page
    2. Cover Picture
    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. HUPO Highlights
    7. Viewpoint
    8. Technology
    9. Nanoproteomics
    10. Bioinformatics
    11. Systems Biology
    12. Protein Arrays
    13. Cell Biology
    14. Microbiology
    15. Plant Proteomics
    16. Animal Proteomics
    17. Errata
    1. Triplex protein quantification based on stable isotope labeling by peptide dimethylation applied to cell and tissue lysates (pages 4624–4632)

      Paul J. Boersema, Thin Thin Aye, Toon A. B. van Veen, Albert J. R. Heck and Shabaz Mohammed

      Version of Record online: 10 OCT 2008 | DOI: 10.1002/pmic.200800297

    2. Protein Standard Absolute Quantification (PSAQ) for improved investigation of staphylococcal food poisoning outbreaks (pages 4633–4636)

      Alain Dupuis, Jacques-Antoine Hennekinne, Jérôme Garin and Virginie Brun

      Version of Record online: 10 OCT 2008 | DOI: 10.1002/pmic.200800326

    3. Alternating current-assisted on-plate proteolysis for MALDI-TOF MS peptide mapping (pages 4637–4641)

      Sheng Wang, Bangguo Wei, Pengyuan Yang and Gang Chen

      Version of Record online: 15 OCT 2008 | DOI: 10.1002/pmic.200800401

  8. Nanoproteomics

    1. Top of page
    2. Cover Picture
    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. HUPO Highlights
    7. Viewpoint
    8. Technology
    9. Nanoproteomics
    10. Bioinformatics
    11. Systems Biology
    12. Protein Arrays
    13. Cell Biology
    14. Microbiology
    15. Plant Proteomics
    16. Animal Proteomics
    17. Errata
  9. Bioinformatics

    1. Top of page
    2. Cover Picture
    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. HUPO Highlights
    7. Viewpoint
    8. Technology
    9. Nanoproteomics
    10. Bioinformatics
    11. Systems Biology
    12. Protein Arrays
    13. Cell Biology
    14. Microbiology
    15. Plant Proteomics
    16. Animal Proteomics
    17. Errata
    1. Increasing the mass accuracy of high-resolution LC-MS data using background ions – a case study on the LTQ-Orbitrap (pages 4647–4656)

      Richard A. Scheltema, Anas Kamleh, David Wildridge, Charles Ebikeme, David G. Watson, Michael P. Barrett, Ritsert C. Jansen and Rainer Breitling

      Version of Record online: 20 OCT 2008 | DOI: 10.1002/pmic.200800314

    2. Quantitative assessment of the structural bias in protein–protein interaction assays (pages 4657–4667)

      Åsa K. Björklund, Sara Light, Linnea Hedin and Arne Elofsson

      Version of Record online: 15 OCT 2008 | DOI: 10.1002/pmic.200800150

  10. Systems Biology

    1. Top of page
    2. Cover Picture
    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. HUPO Highlights
    7. Viewpoint
    8. Technology
    9. Nanoproteomics
    10. Bioinformatics
    11. Systems Biology
    12. Protein Arrays
    13. Cell Biology
    14. Microbiology
    15. Plant Proteomics
    16. Animal Proteomics
    17. Errata
    1. Proteins modulation in human skeletal muscle in the early phase of adaptation to hypobaric hypoxia (pages 4668–4679)

      Agnese Viganò, Marilena Ripamonti, Sara De Palma, Daniele Capitanio, Michele Vasso, Robin Wait, Carsten Lundby, Paolo Cerretelli and Cecilia Gelfi

      Version of Record online: 20 OCT 2008 | DOI: 10.1002/pmic.200800232

  11. Protein Arrays

    1. Top of page
    2. Cover Picture
    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. HUPO Highlights
    7. Viewpoint
    8. Technology
    9. Nanoproteomics
    10. Bioinformatics
    11. Systems Biology
    12. Protein Arrays
    13. Cell Biology
    14. Microbiology
    15. Plant Proteomics
    16. Animal Proteomics
    17. Errata
    1. Profiling humoral immune responses to P. falciparum infection with protein microarrays (pages 4680–4694)

      Denise L. Doolan, Yunxiang Mu, Berkay Unal, Suman Sundaresh, Siddiqua Hirst, Conrad Valdez, Arlo Randall, Douglas Molina, Xiaowu Liang, Daniel A. Freilich, J. Aggrey Oloo, Peter L. Blair, Joao C. Aguiar, Pierre Baldi, D. Huw Davies and Philip L. Felgner

      Version of Record online: 20 OCT 2008 | DOI: 10.1002/pmic.200800194

  12. Cell Biology

    1. Top of page
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    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. HUPO Highlights
    7. Viewpoint
    8. Technology
    9. Nanoproteomics
    10. Bioinformatics
    11. Systems Biology
    12. Protein Arrays
    13. Cell Biology
    14. Microbiology
    15. Plant Proteomics
    16. Animal Proteomics
    17. Errata
    1. PTPϵ has a critical role in signaling transduction pathways and phosphoprotein network topology in red cells (pages 4695–4708)

      Lucia De Franceschi, Andrea Biondani, Franco Carta, Franco Turrini, Carlo Laudanna, Renzo Deana, Anna Maria Brunati, Loris Turretta, Achille Iolascon, Silverio Perrotta, Ari Elson, Cristina Bulato and Carlo Brugnara

      Version of Record online: 15 OCT 2008 | DOI: 10.1002/pmic.200700596

    2. Alteration of S-nitrosothiol homeostasis and targets for protein S-nitrosation in human hepatocytes (pages 4709–4720)

      Laura M. López-Sánchez, Fernando J. Corrales, Raúl González, Gustavo Ferrín, Juan R. Muñoz-Castañeda, Isidora Ranchal, Ana B. Hidalgo, Javier Briceño, Pedro López-Cillero, Miguel A. Gómez, Manuel De La Mata, Jordi Muntané and Antonio Rodríguez-Ariza

      Version of Record online: 10 OCT 2008 | DOI: 10.1002/pmic.200700313

    3. Interaction proteomics of the HMGA chromatin architectural factors (pages 4721–4732)

      Riccardo Sgarra, Cristina Furlan, Salvina Zammitti, Alessandra Lo Sardo, Elisa Maurizio, Julie Di Bernardo, Vincenzo Giancotti and Guidalberto Manfioletti

      Version of Record online: 10 OCT 2008 | DOI: 10.1002/pmic.200800193

    4. Proteomic analysis of membrane rafts of melanoma cells identifies protein patterns characteristic of the tumor progression stage (pages 4733–4747)

      Frédérique Baruthio, Manfredo Quadroni, Curzio Rüegg and Agnese Mariotti

      Version of Record online: 22 OCT 2008 | DOI: 10.1002/pmic.200800169

    5. A comparative proteomic analysis for capsaicin-induced apoptosis between human hepatocarcinoma (HepG2) and human neuroblastoma (SK-N-SH) cells (pages 4748–4767)

      Yu Mi Baek, Hye Jin Hwang, Sang Woo Kim, Hee Sun Hwang, Sung Hak Lee, Jung Ae Kim and Jong Won Yun

      Version of Record online: 7 NOV 2008 | DOI: 10.1002/pmic.200800094

  13. Microbiology

    1. Top of page
    2. Cover Picture
    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. HUPO Highlights
    7. Viewpoint
    8. Technology
    9. Nanoproteomics
    10. Bioinformatics
    11. Systems Biology
    12. Protein Arrays
    13. Cell Biology
    14. Microbiology
    15. Plant Proteomics
    16. Animal Proteomics
    17. Errata
    1. Structural features and the persistence of acquired proteins (pages 4772–4781)

      Hema Prasad Narra, Matthew H. J. Cordes and Howard Ochman

      Version of Record online: 15 OCT 2008 | DOI: 10.1002/pmic.200800061

  14. Plant Proteomics

    1. Top of page
    2. Cover Picture
    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. HUPO Highlights
    7. Viewpoint
    8. Technology
    9. Nanoproteomics
    10. Bioinformatics
    11. Systems Biology
    12. Protein Arrays
    13. Cell Biology
    14. Microbiology
    15. Plant Proteomics
    16. Animal Proteomics
    17. Errata
    1. Functions of defense-related proteins and dehydrogenases in resistance response induced by salicylic acid in sweet cherry fruits at different maturity stages (pages 4791–4807)

      Zhulong Chan, Qing Wang, Xiangbin Xu, Xianghong Meng, Guozheng Qin, Boqiang Li and Shiping Tian

      Version of Record online: 15 OCT 2008 | DOI: 10.1002/pmic.200701155

    2. Proteomic profiling of rice embryos from a hybrid rice cultivar and its parental lines (pages 4808–4821)

      Weiwei Wang, Bo Meng, Xiaomeng Ge, Shuhui Song, Yue Yang, Xiaomin Yu, Liguo Wang, Songnian Hu, Siqi Liu and Jun Yu

      Version of Record online: 10 OCT 2008 | DOI: 10.1002/pmic.200701164

  15. Animal Proteomics

    1. Top of page
    2. Cover Picture
    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. HUPO Highlights
    7. Viewpoint
    8. Technology
    9. Nanoproteomics
    10. Bioinformatics
    11. Systems Biology
    12. Protein Arrays
    13. Cell Biology
    14. Microbiology
    15. Plant Proteomics
    16. Animal Proteomics
    17. Errata
    1. Proteomic analysis of the neuroprotective mechanisms of acupuncture treatment in a Parkinson's disease mouse model (pages 4822–4832)

      Songhee Jeon, Youn Jung Kim, Seung-Tae Kim, Woongjoon Moon, Younbyoung Chae, Minjeong Kang, Mi-Young Chung, Hyangsook Lee, Mi-Sook Hong, Joo-Ho Chung, Tong H. Joh, Hyejung Lee and Hi-Joon Park

      Version of Record online: 22 OCT 2008 | DOI: 10.1002/pmic.200700955

  16. Errata

    1. Top of page
    2. Cover Picture
    3. In this issue
    4. Contents
    5. From Our Sister Journal
    6. HUPO Highlights
    7. Viewpoint
    8. Technology
    9. Nanoproteomics
    10. Bioinformatics
    11. Systems Biology
    12. Protein Arrays
    13. Cell Biology
    14. Microbiology
    15. Plant Proteomics
    16. Animal Proteomics
    17. Errata
    1. You have free access to this content
      Marked correlations in protein expression identified by proteomic analysis of human spermatozoa (page 4833)

      Sara de Mateo, Juan Martínez-Heredia, Josep Maria Estanyol, David Domíguez-Fandos, José Manuel Vidal-Taboada, José Luis Ballescà and Rafael Oliva

      Version of Record online: 7 NOV 2008 | DOI: 10.1002/pmic.200890081

      This article corrects:

      Marked correlations in protein expression identified by proteomic analysis of human spermatozoa

      Vol. 7, Issue 23, 4264–4277, Version of Record online: 26 NOV 2007

    2. You have free access to this content
      Protein expression profile of Gluconacetobacter diazotrophicus PAL5, a sugarcane endophytic plant growth-promoting bacterium (page 4833)

      Leticia M. S. Lery, Ana Coelho, Wanda M. A. von Kruger, Mayla S. M. Gonçalves, Marise F. Santos, Richard H. Valente, Eidy O. Santos, Surza L. G. Rocha, Jonas Perales, Gilberto B. Domont, Katia R. S. Teixeira, Marcelo Bertalan, Paulo C. G. Ferreira and Paulo M. Bisch

      Version of Record online: 7 NOV 2008 | DOI: 10.1002/pmic.200890083

      This article corrects:

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