SEARCH

SEARCH BY CITATION

References

  • 1
    Prangishvili D, Forterre P, Garrett RA ( 2006) Viruses of the Archaea: a unifying view. Nat Rev Microbiol 4: 837848.
  • 2
    Prangishvili D, Garrett RA, Koonin EV ( 2006) Evolutionary genomics of archaeal viruses: unique viral genomes in the third domain of life. Virus Res 117: 5267.
  • 3
    Bettstetter M, Peng X, Garrett RA, Prangishvili D ( 2003) AFV1, a novel virus infecting hyperthermophilic archaea of the genus Acidianus. Virology 315: 6879.
  • 4
    Kraft P, Kummel D, Oeckinghaus A, Gauss GH, Wiedenheft B, Young M, Lawrence CM ( 2004) Structure of D-63 from Sulfolobus spindle-shaped virus 1: surface properties of the dimeric four-helix bundle suggest an adaptor protein function. J Virol 78: 74387442.
  • 5
    Menon SK, Maaty WS, Corn GJ, Kwok SC, Eilers BJ, Kraft P, Gillitzer E, Young MJ, Bothner B, Lawrence CM ( 2008) Cysteine usage in Sulfolobus spindle-shaped virus 1 and extension to hyperthermophilic viruses in general. Virology 376: 270278.
  • 6
    Kraft P, Oeckinghaus A, Kummel D, Gauss GH, Gilmore J, Wiedenheft B, Young M, Lawrence CM ( 2004) Crystal structure of F-93 from Sulfolobus spindle-shaped virus 1, a winged-helix DNA binding protein. J Virol 78: 1154411550.
  • 7
    Larson ET, Eilers BJ, Reiter D, Ortmann AC, Young MJ, Lawrence CM ( 2007) A new DNA binding protein highly conserved in diverse crenarchaeal viruses. Virology 363: 387396.
  • 8
    Larson ET, Eilers B, Menon S, Reiter D, Ortmann A, Young MJ, Lawrence CM ( 2007) A winged-helix protein from Sulfolobus turreted icosahedral virus points toward stabilizing disulfide bonds in the intracellular proteins of a hyperthermophilic virus. Virology 368: 249261.
  • 9
    Larson ET, Reiter D, Young M, Lawrence CM ( 2006) Structure of A197 from Sulfolobus turreted icosahedral virus: a crenarchaeal viral glycosyltransferase exhibiting the GT-A fold. J Virol 80: 76367644.
  • 10
    Khayat R, Tang L, Larson ET, Lawrence CM, Young M, Johnson JE ( 2005) Structure of an archaeal virus capsid protein reveals a common ancestry to eukaryotic and bacterial viruses. Proc Natl Acad Sci USA 102: 1894418949.
  • 11
    Keller J, Leulliot N, Cambillau C, Campanacci V, Porciero S, Prangishvilli D, Forterre P, Cortez D, Quevillon-Cheruel S, van Tilbeurgh H ( 2007) Crystal structure of AFV3-109, a highly conserved protein from crenarchaeal viruses. Virol J 4: 1222.
  • 12
    Goulet A, Spinelli S, Campanacci V, Porciero S, Blangy S, Garrett RA, van Tilbeurgh H, Leulliot N, Basta T, Prangishvili D, Cambillau C ( 2006) Crystallization and preliminary X-ray diffraction analysis of protein 14 from Sulfolobus islandicus filamentous virus (SIFV). Acta Crystallogr Sect F Struct Biol Cryst Commun 62: 884886.
  • 13
    Holm L, Sander C ( 1995) Dali: a network tool for protein structure comparison. Trends Biochem Sci 20: 478480.
  • 14
    Vieille C, Zeikus GJ ( 2001) Hyperthermophilic enzymes: sources, uses, and molecular mechanisms for thermostability. Microbiol Mol Biol Rev 65: 143.
  • 15
    Li WF, Zhou XX, Lu P ( 2005) Structural features of thermozymes. Biotechnol Adv 23: 271281.
  • 16
    Chakravarty S, Varadarajan R ( 2002) Elucidation of factors responsible for enhanced thermal stability of proteins: a structural genomics based study. Biochemistry 41: 81528161.
  • 17
    Unsworth LD, van der Oost J, Koutsopoulos S ( 2007) Hyperthermophilic enzymes--stability, activity and implementation strategies for high temperature applications. FEBS J 274: 40444056.
  • 18
    Cambillau C, Claverie JM ( 2000) Structural and genomic correlates of hyperthermostability. J Biol Chem 275: 3238332386.
  • 19
    Thompson MJ, Eisenberg D ( 1999) Transproteomic evidence of a loop-deletion mechanism for enhancing protein thermostability. J Mol Biol 290: 595604.
  • 20
    Vogt G, Woell S, Argos P ( 1997) Protein thermal stability, hydrogen bonds, and ion pairs. J Mol Biol 269: 631643.
  • 21
    Doublie S ( 1997) Preparation of selenomethionyl proteins for phase determination. Methods Enzymol 276: 523530.
  • 22
    Collaborative Computational Project, number 4, 4 C. C. P. N ( 1994) The CCP4 suite: programs for crystallography. Acta Crystallogr D Biol Crystallogr 50: 760766.
  • 23
    Sheldrick GM ( 2008) A short history of SHELX. Acta Crystallogr A 64, 112122.
  • 24
    Perrakis A, Morris R, Lamzin VS ( 1999) Automated protein model building combined with iterative structure refinement. Nat Struct Biol 6: 458463.
  • 25
    Emsley P, Cowtan K ( 2004) Coot: model-building tools for molecular graphics. Acta Crystallogr D Biol Crystallogr 60: 21262132.
  • 26
    Murshudov GN, Vagin AA, Dodson EJ ( 1997) Refinement of macromolecular structures by the maximum-likelihood method. Acta Crystallogr D Biol Crystallogr 53: 240255.
  • 27
    Painter J, Merritt EA ( 2006) Optimal description of a protein structure in terms of multiple groups undergoing TLS motion. Acta Crystallogr D Biol Crystallogr 62: 439450.
  • 28
    Laskowski R, MacArthur M, Moss D, Thornton J ( 1993) PROCHECK: a program to check the stereochemical quality of protein structures. J Appl Crystallog 26: 9197.