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A superfamily of metalloenzymes unifies phosphopentomutase and cofactor-independent phosphoglycerate mutase with alkaline phosphatases and sulfatases
Article first published online: 31 DEC 2008
DOI: 10.1002/pro.5560070819
Copyright © 1998 The Protein Society
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How to Cite
Galperin, M. Y., Koonin, E. V. and Bairoch, A. (1998), A superfamily of metalloenzymes unifies phosphopentomutase and cofactor-independent phosphoglycerate mutase with alkaline phosphatases and sulfatases. Protein Science, 7: 1829–1835. doi: 10.1002/pro.5560070819
Publication History
- Issue published online: 31 DEC 2008
- Article first published online: 31 DEC 2008
- Manuscript Accepted: 4 MAY 1998
- Manuscript Received: 22 DEC 1997
References
- , . 1997. Characterization of point mutations in patients with X-linked ichthyosis. Effects on the structure and function of the steroid sulfatase protein. J Biol Chem 272: 20756–20763.
- , , , , , , . 1997. Gapped BLAST and PSI-BLAST—A new generation of protein database search programs. Nucleic Acids Res 25: 3389–3402.
- , , . 1970. Phosphate binding to alkaline phosphatase. Metal ion dependence. J Biol Chem 245: 4968–4976.
- , 1997. The SWISS-PROT protein sequence data bank and its supplement TrEMBL. Nucleic Acids Res 25: 31–36.
- , . 1983. Purification and characterization of phosphopen-tomutase from rat liver. Biochim Biophys Acta 743: 162–171.
- , , , . 1995. Autophosphorylation of PC-1 (alkaline phosphodiesterase I/nucleotide pyrophosphatase) and analysis of the active site. Eur J Biochem 228: 669–676.
- , , . 1994. Divalent cations stabilize the conformation of plasma cell membrane glycoprotein PC-1 (alkaline phosphodiesterase 1). Biochem J 304: 75–80.
- , , , . 1990. Human liver iduronate-2-sulphatase. Purification, characterization and catalytic properties. Biochem J 271: 75–86.
- , . 1991. Human liver N-acetylgalactosamine 6-sulphatase. Purification and characterization. Biochem J 279: 515–520.
- , . 1980. Phosphoglycerate mutases: Stereochemical course of the phosphoryl group transfers catalyzed by the cofactor-dependent enzyme from rabbit muscle and the cofactor-independent enzyme from wheat germ. Biochemistry 19: 738–743.
- , , , , , , . 1997. Structure of a human lysosomal sulfatase. Structure 5: 277–289.
- , . 1986. Isozymes of phosphoglyceromutase from the developing endosperm of Ricinus communis: Isolation and kinetic propertieh. Arch Biochem Biophys 245: 96–103.
- , . 1977. Phosphoglycerate mutase from wheat germ: Studies with 18O-laheled substrate, investigations of the phosphatase and phosphoryl transfer activities, and evidence for a phosphoryl-enzyme intermediate. Biochemistry 16: 3054–3060.
- , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , . 1996. Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii. Science 273: 1058–1073.
- , , , , 1982. Phylogeny and ontogeny of the phosphoglycerate mutasesmdashIV. Distribution of glycerate-2,3-P2 dependent and independent phosphoglycerate mutases in algae, fungi, plants and animals. Comp Biochem Physiol [B] 71: 591–597.
- , , , . 1997. Autotaxin is an exoenzyme possessing 5′-nucleotide phosphodiesterase/ATP pyrophosphatase and ATPase activities. J Biol Chem 272: 996–1001.
- . 1992. Structure and mechanism of alkaline phosphatase. Annu Rev Biophys 21: 441–483.
- , , , . 1996. Purification and characterization of Ca2+ -ATPase of Flavobacterium odoratum. J Biol Chem 271: 3945–3951.
- , , , , . 1996. Identification, characterization, and cloning of a phosphonate monoester hydrolase from Burkholderia caryophilli PG2982. J Biol Chem 271: 25754–25761.
- , . 1989. The phosphoglycerate mutases. Adv Enzymol 62: 227–313.
- , . 1987. Human liver N-acetylglucosamine-6-sulphate sulphatase. Catalytic properties. Biochem J 246: 355–365.
- , . 1992. Human glucosamine-6-sulphatase deficiency. Diagnostic enzymology towards heparin-derived trisaccharide substrates. Biochem J 282: 605–614.
- , , , , , , , , 1992. Cloning and sequencing of a cDNA encoding 2,3-bisphosphoglycerate-independent phosphoglycerate mutase from maize. Possible relationship to the alkaline phosphatase family. J Bid Chem 267: 12797–12803.
- , , , , , , 1995. 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase is conserved among different phylogenic kingdoms. Comp Biochem Physiol B Biochem Mol Biol 112: 287–293.
- 1983. Nucleoside catabolism. In: Munch-PetersenA, ed. Metabolism of nucleotides, nucleosides and nucleobases in microorganisms. London: Academic Press. pp 203–258
- , 1970. Phosphodeoxyribomutase from Escherichia coli. Purification and some properties. Eur J Biochem 17: 397–407. Direct Link:
- , , , , . 1992. Different missense mutations at the tissue-nonspecific alkaline phosphatase gene locus in autosomal recessively inherited forms of mild and severe hypophos-phatasia. Proc Nat1 Acad Sci USA 89: 9924–9928.
- , , , , , 1996. Characterization of two arylsulfatase A missense mutations D335V and T274M causing late infantile metachromatic leukodystrophy. Hum Mutat 7: 311–317. Direct Link:
- , 1998. Touring protein fold space with Dali/FSSP. Nucleic Acids Res 26: 318–321.
- , , , , . 1993. Higher-plant cofactor-independent phosphoglyceromutase: Purification, molecular characterization and expression. Plant Mol Biol 23: 1039–1053.
- , . 1995. Histidine residues 139, 363 and 500 are essential for catalytic activity of cofactor-independent phosphoglyceromutase from developing endosperm of the castor plant. Eur J Biochem 229: 395–402.
- , . 1983. The biosynthesis of membrane-derived oligosaccharides. A membrane-bound phosphoglycerol transferase. J Biol Chem 258: 2394–2398.
- , . 1986. Characterization of Haemophilus influenzae nucleotide pyrophosphatase. An enzyme of critical importance for growth of the organism. J Biol Chem 261: 6016–6025.
- , . 1991. Reaction mechanism of alkaline phosphatase based on crystal structures. Two-metal ion catalysis. J Mol Biol 218: 449–464.
- , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , . 1997. The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus. Nature 390: 364–370.
- , , , . 1997. Comparison of archaeal and bacterial genomes: Computer analysis of protein sequences predicts novel functions and suggests a chimeric origin for the archaea. Mol Microbiol 25: 619–637. Direct Link:
- , , 1993. Manganese(II) activation of 3-phospho-glycerate mutase of Bacillus megaterium: pH-sensitive interconversion of active and Inactive forms. Arch Biochem Biophys 306: 342–349.
- , , , , 1995. Cooperative manganese (II) activation of 3-phosphoglycerate mutase of Bacillus megaterium: A biological pH-sensing mechanism in bacterial spore formation and germination. Arch Biochem Biophys 320: 35–42.
- , , . 1997. Cloning of the phosphonoacetate hydrolase gene from Pseudomonas fluorrscens 23F encoding a new type of carbon-phosphorus bond cleaving enzyme and its expression in Escherichia coli and Pseudomonas putida. Gene 195: 49–53.
- , , , , . 1977. Appendix: Phosphoglycerate mutase from wheat germ: Isolation, crystallization, and properties. Biochemistry 16: 3045–3053.
- , , , 1995. The carboxyphosphonoenolpyruvate Eynthase-encoding gene from the bialaphos-producing organism Streptomyces hJgroscopicus. Gene 153: 143–144.
- , 1994. Cloning and nucleotide sequences of the genes encoding triose phosphate isomerase, phosphoglycerate mutase, and enolase from Bacillus subtilis. J Bucteriol I76: 3903–3910.
- , , , , , , , 1996. A D255H substitution in the arylsulphatase A gene of two unrelated Belgian patients with late-infantile metachromatic leukodystrophy. J Inherit Metub Dis 19: 782–786.
- , , , , , , 1998. Crystal structure of human arylsulfatase A: The aldehyde function and the metal ion at the active site suggest a novel mechanism for sulfate ester hydrolysis. Biochemistry 37: 3654–3664.
- , , , , , , , , , et al. 1995. Membrane glycoprotein PC-1 and insulin resistance in non-insulin-dependent diabetes mellitus. Nature 373: 448–451.
- , 1991 Genetics of streptomycin production in Streptomyces griseus: Nucleotide sequence of five genes, strFGHIK, including a phosphatase gene. Mol Gen Genet 228: 459–469.
- , , , , . 1995. The purification and properties of phosphonoacetate hydrolase, a novel carbon-phosphorus bond-cleavage enzyme from Pseudomonus fluorescens 23F. Eur J Biochem 234: 225–230. Direct Link:
- , , , , . 1995. Isolation and sequence analysis of the Pseudomonas syringae pv. tomato gene encoding a 2,3-diphosphoglycerate-independent phosphoglyceromutase. J Bacteriol 177: 1727–1733.
- , , . 1995. Mutations at positions 153 and 328 in Escherichia coli alkaline phosphatase provide insight towards the structure and function of mammalian and yeast alkaline phosphatases. J Mol Biol 253: 604–617.
- , , , , 1997. Studies on the biosynthesis of bialaphos. Biochemical mechanism of C-P bond formation: Discovery of phosphonopyruvate decarboxylase which catalyzes the formation of phosphonoacetaldehyde from phosphonopyruvate. J Antibiot 50: 212–219.
- , , , . 1993. The major acidic fibroblast growth factor (aFGF)-stimulated phosphoprotein from bovine liver plasma membranes has aFGF-stimulated kinase, autoadenylylation, and alkaline nucleotide phosphodiesterase activities. J Biol Chem 268: 27318–27326.
- , , 1997. The sulfatase gene family. Curr Opin Genet Dev 7: 386–391.
- , , . 1996. Clonmg and expression of the unique Ca2+ -ATPase from Flavobacterium odoratum. J Biol Chem 271: 5095–5100.
- , , , , . 1997. A reconstruction of the metabolism of Methanococcus jannaschii from sequence data. Gene 197: GC11–GC26.
- , 1978. Phosphoglycerate mutase in developing forespores of Bacillus megaterium may be regulated by the intrasporal level of free manganous ion. Biochem Biophys Res Commun 82: 1–5.
- , 1979a. Purification and properties of phosphoglycerate phosphomutase from spores and cells of Bacillus megaterium. J Bacterio1 137: 1024–1027.
- , 1979b. Regulation of phosphoglycerate phosphomutase in developing forespores and dormant and germinated spores of Bacillus megaterium by the level of free manganous ions. J Bacteriol 139: 889–898.
- , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , . 1997. Complete genome sequence of Melhanobacterium thermoautotrophicum deltaH: Functional analysis and comparative genomics. J Bacteriol 179: 7135–7155.
- , . 1985. Wheat germ phosphoglycerate mutase: Purification, polymorphism, and inhibition. Biochem Biophys Res Commun 131: 743–749.
- , , . 1986. Wheat germ phosphoglycerate mutase: Evidence for a metalloenzyme. Biochem Biophys Res Commun 136: 336–340.
- , 1979. Purification and properties of the manganese-dependent phosphoglycerate mutase of Bacillus subtilis. J Bacteriol 137: 773–778.
- , , . 1994. Pathway of glycogen metabolism in Methanococcus maripaludis. J Bucteriol 176: 325–332.
- , , , , , 1996. A low molecular weight outer-membrane protein of Escherichia coli O157:H7 associated with adherence to 1NT407 cells and chicken caeca. J Med Microhiol 45: 90–96.

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