The article was originally published online as an accepted preprint. The “Published Online” date corresponds to the preprint version.
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CASP6 Definitions and Classifications
Domain definition and target classification for CASP6†
Article first published online: 26 SEP 2005
DOI: 10.1002/prot.20717
Copyright © 2005 Wiley-Liss, Inc.
Issue
Proteins: Structure, Function, and Bioinformatics
Supplement: Sixth Meeting on the Critical Assessment of Techniques for Protein Structure Prediction
Volume 61, Issue Supplement 7, pages 8–18, 2005
Additional Information
How to Cite
Tress, M., Tai, C.-H., Wang, G., Ezkurdia, I., López, G., Valencia, A., Lee, B. and Dunbrack, R. L. (2005), Domain definition and target classification for CASP6. Proteins: Structure, Function, and Bioinformatics, 61: 8–18. doi: 10.1002/prot.20717
- †
Publication History
- Issue published online: 29 DEC 2005
- Article first published online: 26 SEP 2005
- Manuscript Accepted: 1 JUL 2005
- Manuscript Received: 6 JUN 2005
Funded by
- National Institutes of Health. Grant Number: R01-HG02302
- Intramural Research Program at the NIH National Cancer Institute, Center for Cancer Research
- Abstract
- Article
- References
- Cited By
Abstract
Assessment of structure predictions in CASP6 was based on single domains isolated from experimentally determined structures, which were categorized into comparative modeling, fold recognition, and new fold targets. Domain definitions were defined upon visual examination of the structures with the aid of automated domain-parsing programs. Domain categorization was determined by comparison of the target structures with those in the Protein Data Bank at the time each target expired and a variety of sequence and structure-based methods to determine potential homologous relationships. Proteins 2005;Suppl 7:8–18. © 2005 Wiley-Liss, Inc.