Proteins: Structure, Function, and Bioinformatics

Cover image for Proteins: Structure, Function, and Bioinformatics

1 July 2004

Volume 56, Issue 1

Pages 1–179

  1. Short Reviews

    1. Top of page
    2. Short Reviews
    3. Short Communication
    4. Research Articles
    5. Structure Notes
    6. Research Articles
    7. Structure Note
    1. Designing proteins from the inside out (pages 1–10)

      Salvador Ventura and Luis Serrano

      Version of Record online: 7 MAY 2004 | DOI: 10.1002/prot.20142

  2. Short Communication

    1. Top of page
    2. Short Reviews
    3. Short Communication
    4. Research Articles
    5. Structure Notes
    6. Research Articles
    7. Structure Note
    1. Prediction of transmembrane regions of β-barrel proteins using ANN- and SVM-based methods (pages 11–18)

      Navjyot K. Natt, Harpreet Kaur and G. P. S. Raghava

      Version of Record online: 7 MAY 2004 | DOI: 10.1002/prot.20092

  3. Research Articles

    1. Top of page
    2. Short Reviews
    3. Short Communication
    4. Research Articles
    5. Structure Notes
    6. Research Articles
    7. Structure Note
    1. Structural and sequence comparisons arising from the solution structure of the transcription elongation factor NusG from Thermus thermophilus (pages 40–51)

      Paul Reay, Kazuhiko Yamasaki, Takaho Terada, Seiki Kuramitsu, Mikako Shirouzu and Shigeyuki Yokoyama

      Version of Record online: 28 APR 2004 | DOI: 10.1002/prot.20054

    2. Toward the active conformations of rhodopsin and the β2-adrenergic receptor (pages 67–84)

      Paul R. Gouldson, Nathan J. Kidley, Robert P. Bywater, Georgios Psaroudakis, Harry D. Brooks, Constantino Diaz, David Shire and Christopher A. Reynolds

      Version of Record online: 16 APR 2004 | DOI: 10.1002/prot.20108

    3. The structure of murine neuroglobin: Novel pathways for ligand migration and binding (pages 85–92)

      Beatrice Vallone, Karin Nienhaus, Maurizio Brunori and G. Ulrich Nienhaus

      Version of Record online: 7 MAY 2004 | DOI: 10.1002/prot.20113

    4. Partial atomic charges of amino acids in proteins (pages 102–109)

      Annick Thomas, Alain Milon and Robert Brasseur

      Version of Record online: 16 APR 2004 | DOI: 10.1002/prot.20093

    5. Folding thermodynamics of three β-sheet peptides: A model study (pages 110–116)

      Anders Irbäck and Fredrik Sjunnesson

      Version of Record online: 7 MAY 2004 | DOI: 10.1002/prot.20157

    6. Hydrophobic complementarity in protein–protein docking (pages 130–142)

      Alexander Berchanski, Boaz Shapira and Miriam Eisenstein

      Version of Record online: 7 MAY 2004 | DOI: 10.1002/prot.20145

    7. A method for simultaneous alignment of multiple protein structures (pages 143–156)

      Maxim Shatsky, Ruth Nussinov and Haim J. Wolfson

      Version of Record online: 28 APR 2004 | DOI: 10.1002/prot.10628

    8. Probabilistic description of protein alignments for sequences and structures (pages 157–166)

      Ryotaro Koike, Kengo Kinoshita and Akinori Kidera

      Version of Record online: 16 APR 2004 | DOI: 10.1002/prot.20067

  4. Structure Notes

    1. Top of page
    2. Short Reviews
    3. Short Communication
    4. Research Articles
    5. Structure Notes
    6. Research Articles
    7. Structure Note
    1. Crystal structure of a glycerophosphodiester phosphodiesterase (GDPD) from Thermotoga maritima (TM1621) at 1.60 Å resolution (pages 167–170)

      Eugenio Santelli, Robert Schwarzenbacher, Daniel McMullan, Tanya Biorac, Linda S. Brinen, Jaume M. Canaves, Jamison Cambell, Xiaoping Dai, Ashley M. Deacon, Marc-André Elsliger, Said Eshagi, Ross Floyd, Adam Godzik, Carina Grittini, Slawomir K. Grzechnik, Lukasz Jaroszewski, Cathy Karlak, Heath E. Klock, Eric Koesema, John S. Kovarik, Andreas Kreusch, Peter Kuhn, Scott A. Lesley, Timothy M. McPhillips, Mitchell D. Miller, Andrew Morse, Kin Moy, Jie Ouyang, Rebecca Page, Kevin Quijano, Fred Rezezadeh, Alyssa Robb, Eric Sims, Glen Spraggon, Raymond C. Stevens, Henry van den Bedem, Jeff Velasquez, Juli Vincent, Frank von Delft, Xianhong Wang, Bill West, Guenter Wolf, Qingping Xu, Keith O. Hodgson, John Wooley and Ian A. Wilson

      Version of Record online: 7 MAY 2004 | DOI: 10.1002/prot.20120

  5. Research Articles

    1. Top of page
    2. Short Reviews
    3. Short Communication
    4. Research Articles
    5. Structure Notes
    6. Research Articles
    7. Structure Note
    1. Crystal structure of a ribose-5-phosphate isomerase RpiB (TM1080) from Thermotoga maritima at 1.90 Å resolution (pages 171–175)

      Qingping Xu, Robert Schwarzenbacher, Daniel McMullan, Frank von Delft, Linda S. Brinen, Jaume M. Canaves, Xiaoping Dai, Ashley M. Deacon, Marc-André Elsliger, Said Eshagi, Ross Floyd, Adam Godzik, Carina Grittini, Slawomir K. Grzechnik, Lukasz Jaroszewski, Cathy Karlak, Heath E. Klock, Eric Koesema, John S. Kovarik, Andreas Kreusch, Peter Kuhn, Scott A. Lesley, Inna Levin, Timothy M. McPhillips, Mitchell D. Miller, Andrew Morse, Kin Moy, Jie Ouyang, Rebecca Page, Kevin Quijano, Alyssa Robb, Glen Spraggon, Raymond C. Stevens, Henry van den Bedem, Jeff Velasquez, Juli Vincent, Xianhong Wang, Bill West, Guenter Wolf, Keith O. Hodgson, John Wooley and Ian A. Wilson

      Version of Record online: 7 MAY 2004 | DOI: 10.1002/prot.20129

  6. Structure Note

    1. Top of page
    2. Short Reviews
    3. Short Communication
    4. Research Articles
    5. Structure Notes
    6. Research Articles
    7. Structure Note
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