Proteins: Structure, Function, and Bioinformatics

Cover image for Proteins: Structure, Function, and Bioinformatics

1 February 2005

Volume 58, Issue 2

Pages 255–508

  1. Short Communications

    1. Top of page
    2. Short Communications
    3. Research Articles
    4. Structure Notes
    1. Structural evidence for variable oligomerization of the N-terminal domain of cyclase-associated protein (CAP) (pages 255–262)

      Adlina Mohd Yusof, Nien-Jen Hu, Alexander Wlodawer and Andreas Hofmann

      Version of Record online: 19 NOV 2004 | DOI: 10.1002/prot.20314

  2. Research Articles

    1. Top of page
    2. Short Communications
    3. Research Articles
    4. Structure Notes
    1. Elucidation of information encoded in tryptophan 140 of staphylococcal nuclease (pages 271–277)

      Satoshi Hirano, Hironari Kamikubo, Yoichi Yamazaki and Mikio Kataoka

      Version of Record online: 30 NOV 2004 | DOI: 10.1002/prot.20333

    2. Design of a data model for developing laboratory information management and analysis systems for protein production (pages 278–284)

      Anne Pajon, John Ionides, Jon Diprose, Joël Fillon, Rasmus Fogh, Alun W. Ashton, Helen Berman, Wayne Boucher, Miroslaw Cygler, Emeline Deleury, Robert Esnouf, Joël Janin, Rosalind Kim, Isabelle Krimm, Catherine L. Lawson, Eric Oeuillet, Anne Poupon, Stéphane Raymond, Tim Stevens, Herman van Tilbeurgh, John Westbrook, Peter Wood, Eldon Ulrich, Wim Vranken, Li Xueli, Ernest Laue, David I. Stuart and Kim Henrick

      Version of Record online: 23 NOV 2004 | DOI: 10.1002/prot.20303

    3. MOLE: A data management application based on a protein production data model (pages 285–289)

      Chris Morris, Peter Wood, Susanne L. Griffiths, Keith S. Wilson and Alun W. Ashton

      Version of Record online: 1 OCT 2004 | DOI: 10.1002/prot.20291

    4. PhosphaBase: An ontology-driven database resource for protein phosphatases (pages 290–294)

      K. J. Wolstencroft, R. Stevens, L. Tabernero and A. Brass

      Version of Record online: 22 NOV 2004 | DOI: 10.1002/prot.20325

    5. Theoretical investigations of prostatic acid phosphatase (pages 295–308)

      Satyan Sharma, Päivi Pirilä, Helena Kaija, Katja Porvari, Pirkko Vihko and André H. Juffer

      Version of Record online: 1 DEC 2004 | DOI: 10.1002/prot.20335

    6. Predicting protein functional sites with phylogenetic motifs (pages 309–320)

      David La, Brian Sutch and Dennis R. Livesay

      Version of Record online: 30 NOV 2004 | DOI: 10.1002/prot.20321

    7. A generalized affine gap model significantly improves protein sequence alignment accuracy (pages 329–338)

      Marcus A. Zachariah, Gavin E. Crooks, Stephen R. Holbrook and Steven E. Brenner

      Version of Record online: 23 NOV 2004 | DOI: 10.1002/prot.20299

    8. Structure and dynamics of the human pleckstrin DEP domain: Distinct molecular features of a novel DEP domain subfamily (pages 354–366)

      Concepcion Civera, Bernd Simon, Gunter Stier, Michael Sattler and Maria J. Macias

      Version of Record online: 30 NOV 2004 | DOI: 10.1002/prot.20320

    9. Issues in high-throughput comparative modelling: A case study using the ubiquitin E2 conjugating enzymes (pages 367–375)

      P.J. Winn, J.N.D. Battey, K. Schleinkofer, A. Banerjee and R.C. Wade

      Version of Record online: 22 NOV 2004 | DOI: 10.1002/prot.20318

    10. Topological determinants of protein unfolding rates (pages 389–395)

      Jaewoon Jung, Jooyoung Lee and Hie-Tae Moon

      Version of Record online: 19 NOV 2004 | DOI: 10.1002/prot.20324

    11. Receptor rigidity and ligand mobility in trypsin–ligand complexes (pages 407–417)

      Olgun Guvench, Daniel J. Price and Charles L. Brooks III

      Version of Record online: 1 DEC 2004 | DOI: 10.1002/prot.20326

    12. Effect of T-R conformational change on sickle-cell hemoglobin interactions and aggregation (pages 426–438)

      S. M. Vaiana, M. A. Rotter, A. Emanuele, F. A. Ferrone and M. B. Palma-Vittorelli

      Version of Record online: 30 NOV 2004 | DOI: 10.1002/prot.20339

    13. Characterization of the denaturation of human α-lactalbumin in urea by molecular dynamics simulations (pages 439–449)

      Lorna J. Smith, Rachel M. Jones and Wilfred F. van Gunsteren

      Version of Record online: 19 NOV 2004 | DOI: 10.1002/prot.20287

    14. The solution structure of BmTx3B, a member of the scorpion toxin subfamily α-KTx 16 (pages 489–497)

      Yuefeng Wang, Xiang Chen, Naixia Zhang, Gong Wu and Houming Wu

      Version of Record online: 19 NOV 2004 | DOI: 10.1002/prot.20322

  3. Structure Notes

    1. Top of page
    2. Short Communications
    3. Research Articles
    4. Structure Notes
    1. You have free access to this content
      Crystal structure of the Co-chaperonin Cpn10 from Thermus thermophilus HB8 (pages 498–500)

      Nobutaka Numoto, Akiko Kita and Kunio Miki

      Version of Record online: 19 NOV 2004 | DOI: 10.1002/prot.20317

    2. You have free access to this content
      Crystal structure of PH0010 from Pyrococcus horikoshii, which is highly homologous to human AMMECR 1C-terminal region (pages 501–503)

      Yosuke Tajika, Naoki Sakai, Tomohiro Tamura, Min Yao, Nobuhisa Watanabe and Isao Tanaka

      Version of Record online: 19 NOV 2004 | DOI: 10.1002/prot.20315

    3. You have free access to this content
      Crystal structure of the conserved hypothetical protein MPN330 (GI: 1674200) from Mycoplasma pneumoniae (pages 504–508)

      Debanu Das, Natasha Oganesyan, Hisao Yokota, Ramona Pufan, Rosalind Kim and Sung-Hou Kim

      Version of Record online: 23 NOV 2004 | DOI: 10.1002/prot.20316

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