Proteins: Structure, Function, and Bioinformatics

Cover image for Proteins: Structure, Function, and Bioinformatics

15 August 2005

Volume 60, Issue 3

Pages 325–569

  1. Review

    1. Top of page
    2. Review
    3. Research Articles
    4. Structure Notes
    5. Structure Note
    6. Structure Notes
    1. Comparing protein–ligand docking programs is difficult (pages 325–332)

      Jason C. Cole, Christopher W. Murray, J. Willem M. Nissink, Richard D. Taylor and Robin Taylor

      Article first published online: 3 JUN 2005 | DOI: 10.1002/prot.20497

  2. Research Articles

    1. Top of page
    2. Review
    3. Research Articles
    4. Structure Notes
    5. Structure Note
    6. Structure Notes
    1. Binding MOAD (Mother Of All Databases) (pages 333–340)

      Liegi Hu, Mark L. Benson, Richard D. Smith, Michael G. Lerner and Heather A. Carlson

      Article first published online: 21 JUN 2005 | DOI: 10.1002/prot.20512

    2. Ligand-induced fit in mycobacterial MabA: The sequence-specific C-terminus locks the conformational change (pages 392–400)

      Martin Cohen-Gonsaud, Stéphanie Ducasse-Cabanot, Annaïk Quemard and Gilles Labesse

      Article first published online: 23 JUN 2005 | DOI: 10.1002/prot.20494

    3. Increasing the molecular contacts between maurotoxin and Kv1.2 channel augments ligand affinity (pages 401–411)

      Sarrah M'Barek, Benjamin Chagot, Nicolas Andreotti, Violeta Visan, Pascal Mansuelle, Stephan Grissmer, Mohamed Marrakchi, Mohamed El Ayeb, François Sampieri, Hervé Darbon, Ziad Fajloun, Michel De Waard and Jean-Marc Sabatier

      Article first published online: 21 JUN 2005 | DOI: 10.1002/prot.20509

    4. G-protein-coupled receptor domain overexpression in Halobacterium salinarum: Long-range transmembrane interactions in heptahelical membrane proteins (pages 412–423)

      Veli-Pekka Jaakola, Maria Rehn, Martina Moeller, Ulrike Alexiev, Adrian Goldman and George J. Turner

      Article first published online: 21 JUN 2005 | DOI: 10.1002/prot.20498

    5. Molecular dynamics study of water penetration in staphylococcal nuclease (pages 433–449)

      Ana Damjanović, Bertrand García-Moreno, Eaton E. Lattman and Angel E. García

      Article first published online: 21 JUN 2005 | DOI: 10.1002/prot.20486

    6. QM/MM modeling the Ras–GAP catalyzed hydrolysis of guanosine triphosphate (pages 495–503)

      Bella L. Grigorenko, Alexander V. Nemukhin, Igor A. Topol, Raul E. Cachau and Stanley K. Burt

      Article first published online: 19 MAY 2005 | DOI: 10.1002/prot.20472

    7. Flexibility of prolyl oligopeptidase: Molecular dynamics and molecular framework analysis of the potential substrate pathways (pages 504–512)

      Monika Fuxreiter, Csaba Magyar, Tünde Juhász, Zoltán Szeltner, László Polgár and István Simon

      Article first published online: 21 JUN 2005 | DOI: 10.1002/prot.20508

    8. New method for protein secondary structure assignment based on a simple topological descriptor (pages 513–524)

      Todd Taylor, Margarita Rivera, Glenda Wilson and Iosif I. Vaisman

      Article first published online: 10 MAY 2005 | DOI: 10.1002/prot.20471

  3. Structure Notes

    1. Top of page
    2. Review
    3. Research Articles
    4. Structure Notes
    5. Structure Note
    6. Structure Notes
    1. You have free access to this content
      NMR structure determination of the conserved hypothetical protein TM1816 from Thermotoga maritima (pages 552–557)

      Linda Columbus, Wolfgang Peti, Touraj Etezady-Esfarjani, Torsten Herrmann and Kurt Wüthrich

      Article first published online: 3 JUN 2005 | DOI: 10.1002/prot.20465

    2. Phosphorylation of either Ser16 or Thr30 does not disrupt the structure of the Itch E3 ubiquitin ligase third WW domain (pages 558–560)

      Alison Z. Shaw, Pau Martin-Malpartida, Begoña Morales, Francesc Yraola, Miriam Royo and Maria J. Macias

      Article first published online: 21 JUN 2005 | DOI: 10.1002/prot.20466

  4. Structure Note

    1. Top of page
    2. Review
    3. Research Articles
    4. Structure Notes
    5. Structure Note
    6. Structure Notes
    1. You have free access to this content
      1.6 Å crystal structure of YteR protein from Bacillus subtilis, a predicted lyase (pages 561–565)

      R. Zhang, T. Minh, L. Lezondra, S. Korolev, S.F. Moy, F. Collart and A. Joachimiak

      Article first published online: 19 MAY 2005 | DOI: 10.1002/prot.20410

  5. Structure Notes

    1. Top of page
    2. Review
    3. Research Articles
    4. Structure Notes
    5. Structure Note
    6. Structure Notes
    1. You have free access to this content

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