Proteins: Structure, Function, and Bioinformatics

Cover image for Proteins: Structure, Function, and Bioinformatics

15 May 2006

Volume 63, Issue 3

Pages 413–716

  1. Prediction Reports

    1. Top of page
    2. Prediction Reports
    3. Short Communications
    4. Research Articles
    5. Research Commentary
    6. Structure Note
    7. Erratum
    1. RIP death domain structural interactions implicated in TNF-mediated proliferation and survival (pages 413–423)

      Juilee Thakar, Karin Schleinkofer, Christoph Borner and Thomas Dandekar

      Version of Record online: 8 FEB 2006 | DOI: 10.1002/prot.20895

    2. Novel conserved hydrolase domain in the CLCA family of alleged calcium-activated chloride channels (pages 424–439)

      Krzysztof Pawłowski, Matti Lepistö, Nina Meinander, Ulf Sivars, Mikael Varga and Elisabet Wieslander

      Version of Record online: 9 FEB 2006 | DOI: 10.1002/prot.20887

  2. Short Communications

    1. Top of page
    2. Prediction Reports
    3. Short Communications
    4. Research Articles
    5. Research Commentary
    6. Structure Note
    7. Erratum
    1. Proposed structural models of the prothrombinase (FXa–FVa) complex (pages 440–450)

      Ludovic Autin, Mårten Steen, Björn Dahlbäck and Bruno O. Villoutreix

      Version of Record online: 25 JAN 2006 | DOI: 10.1002/prot.20848

    2. TASSER-based refinement of NMR structures (pages 451–456)

      Seung Yup Lee, Yang Zhang and Jeffrey Skolnick

      Version of Record online: 2 FEB 2006 | DOI: 10.1002/prot.20902

  3. Research Articles

    1. Top of page
    2. Prediction Reports
    3. Short Communications
    4. Research Articles
    5. Research Commentary
    6. Structure Note
    7. Erratum
    1. Benchmarking of dimeric threading and structure refinement (pages 457–465)

      Vera Grimm, Yang Zhang and Jeffrey Skolnick

      Version of Record online: 3 FEB 2006 | DOI: 10.1002/prot.20878

    2. WHISCY: What information does surface conservation yield? Application to data-driven docking (pages 479–489)

      Sjoerd J. de Vries, Aalt D.J. van Dijk and Alexandre M.J.J. Bonvin

      Version of Record online: 31 JAN 2006 | DOI: 10.1002/prot.20842

    3. Structural and thermodynamic consequences of removal of a conserved disulfide bond from equine β-lactoglobulin (pages 595–602)

      Yoshiteru Yamada, Kanako Nakagawa, Takeo Yajima, Keiko Saito, Akihito Tokushima, Kazuo Fujiwara and Masamichi Ikeguchi

      Version of Record online: 3 FEB 2006 | DOI: 10.1002/prot.20905

    4. Involvement of disulfide bonds and histidine 172 in a unique β-sheet to α-helix transition of α1-acid glycoprotein at the biomembrane interface (pages 611–620)

      Koji Nishi, Yoshio Komine, Naoko Fukunaga, Toru Maruyama, Ayaka Suenaga and Masaki Otagiri

      Version of Record online: 7 FEB 2006 | DOI: 10.1002/prot.20923

    5. Hydrogen bonding is the prime determinant of carboxyl pKa values at the N-termini of α-helices (pages 621–635)

      Melissa A. Porter, Jordan R. Hall, James C. Locke, Jan H. Jensen and Pablo A. Molina

      Version of Record online: 30 JAN 2006 | DOI: 10.1002/prot.20879

    6. The fragment transformation method to detect the protein structural motifs (pages 636–643)

      Chih-Hao Lu, Yeong-Shin Lin, Yu-Ching Chen, Chin-Sheng Yu, Shi-Yu Chang and Jenn-Kang Hwang

      Version of Record online: 7 FEB 2006 | DOI: 10.1002/prot.20904

    7. Molecular modeling and inhibitory activity of cowpea cystatin against bean bruchid pests (pages 662–670)

      Juliana M. Aguiar, Octávio L. Franco, Daniel J. Rigden, Carlos Bloch Jr., Ana C.S. Monteiro, Victor M.Q. Flores, Tânia Jacinto, José Xavier-Filho, Antonia E.A. Oliveira, Maria F. Grossi-de-Sá and Kátia V.S. Fernandes

      Version of Record online: 8 FEB 2006 | DOI: 10.1002/prot.20901

    8. Differentiation-dependent expression of hypothetical proteins in the neuroblastoma cell line N1E-115 (pages 671–680)

      Ji-eun Oh, Karlin Raja Karlmark, Jooho Shin, Markus Hengstschläger and Gert Lubec

      Version of Record online: 19 JAN 2006 | DOI: 10.1002/prot.20807

    9. The evolution of ATPase activity in SMC proteins (pages 685–696)

      Neville Cobbe and Margarete M.S. Heck

      Version of Record online: 25 JAN 2006 | DOI: 10.1002/prot.20795

    10. Functional evolution within a protein superfamily (pages 697–708)

      Zhengping Yi, Olga Vitek, M.A. Qasim, Stephen M. Lu, Wuyuan Lu, Michael Ranjbar, Jiangtian Li, Michael C. Laskowski, Chris Bailey-Kellogg and Michael Laskowski Jr.

      Version of Record online: 3 FEB 2006 | DOI: 10.1002/prot.20871

  4. Research Commentary

    1. Top of page
    2. Prediction Reports
    3. Short Communications
    4. Research Articles
    5. Research Commentary
    6. Structure Note
    7. Erratum
  5. Structure Note

    1. Top of page
    2. Prediction Reports
    3. Short Communications
    4. Research Articles
    5. Research Commentary
    6. Structure Note
    7. Erratum
    1. You have free access to this content
      Crystal structure of intein homing endonuclease II encoded in DNA polymerase gene from hyperthermophilic archaeon Thermococcus kodakaraensis strain KOD1 (pages 711–715)

      Hiroyoshi Matsumura, Hitomi Takahashi, Tsuyoshi Inoue, Takahiko Yamamoto, Hiroshi Hashimoto, Motomu Nishioka, Shinsuke Fujiwara, Masahiro Takagi, Tadayuki Imanaka and Yasushi Kai

      Version of Record online: 21 FEB 2006 | DOI: 10.1002/prot.20858

  6. Erratum

    1. Top of page
    2. Prediction Reports
    3. Short Communications
    4. Research Articles
    5. Research Commentary
    6. Structure Note
    7. Erratum
    1. You have free access to this content

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