Proteins: Structure, Function, and Bioinformatics

Cover image for Proteins: Structure, Function, and Bioinformatics

1 November 2008

Volume 73, Issue 2

Pages 271–525

  1. Review

    1. Top of page
    2. Review
    3. Short Communication
    4. Research Articles
    1. You have free access to this content
      Principles of flexible protein–protein docking (pages 271–289)

      Nelly Andrusier, Efrat Mashiach, Ruth Nussinov and Haim J. Wolfson

      Version of Record online: 24 JUL 2008 | DOI: 10.1002/prot.22170

  2. Short Communication

    1. Top of page
    2. Review
    3. Short Communication
    4. Research Articles
    1. Molecular simulations enlighten the binding mode of quercetin to lipoxygenase-3 (pages 290–298)

      Sébastien Fiorucci, Jérôme Golebiowski, Daniel Cabrol-Bass and Serge Antonczak

      Version of Record online: 24 JUL 2008 | DOI: 10.1002/prot.22179

  3. Research Articles

    1. Top of page
    2. Review
    3. Short Communication
    4. Research Articles
    1. HingeMaster: Normal mode hinge prediction approach and integration of complementary predictors (pages 299–319)

      Samuel C. Flores, Kevin S. Keating, Jay Painter, Faruck Morcos, Khang Nguyen, Ethan A. Merritt, Leslie A. Kuhn and Mark B. Gerstein

      Version of Record online: 23 APR 2008 | DOI: 10.1002/prot.22060

    2. Single and multiple input modules in regulatory networks (pages 320–324)

      Arun S. Konagurthu and Arthur M. Lesk

      Version of Record online: 23 APR 2008 | DOI: 10.1002/prot.22053

    3. Isoform-specific variation in the intrinsic disorder of troponin I (pages 338–350)

      Ryan M.B. Hoffman and Brian D. Sykes

      Version of Record online: 23 APR 2008 | DOI: 10.1002/prot.22063

    4. Lattices for ab initio protein structure prediction (pages 351–361)

      Ciro Leonardo Pierri, Anna De Grassi and Antonio Turi

      Version of Record online: 23 APR 2008 | DOI: 10.1002/prot.22070

    5. Crystal structure of DFA0005 complexed with α-ketoglutarate: A novel member of the ICL/PEPM superfamily from alkali-tolerant Deinococcus ficus (pages 362–371)

      Cheng-Jen Liao, Ko-Hsin Chin, Chao-Hsiung Lin, Peter Shi-Fong Tsai, Ping-Chiang Lyu, Chiu-Chung Young, Andrew H.-J. Wang and Shan-Ho Chou

      Version of Record online: 23 APR 2008 | DOI: 10.1002/prot.22071

    6. Structural determinants of ligand migration in Mycobacterium tuberculosis truncated hemoglobin O (pages 372–379)

      Leonardo Boechi, Marcelo A. Martí, Mario Milani, Martino Bolognesi, F. Javier Luque and Darío A. Estrin

      Version of Record online: 23 APR 2008 | DOI: 10.1002/prot.22072

    7. SFCscore: Scoring functions for affinity prediction of protein–ligand complexes (pages 395–419)

      Christoph A. Sotriffer, Paul Sanschagrin, Hans Matter and Gerhard Klebe

      Version of Record online: 28 APR 2008 | DOI: 10.1002/prot.22058

    8. Identification of novel host defense peptides and the absence of α-defensins in the bovine genome (pages 420–430)

      Christopher D. Fjell, Håvard Jenssen, Patrick Fries, Palok Aich, Philip Griebel, Kai Hilpert, Robert E. W. Hancock and Artem Cherkasov

      Version of Record online: 28 APR 2008 | DOI: 10.1002/prot.22059

    9. Structures of a potent phenylalkyl bisphosphonate inhibitor bound to farnesyl and geranylgeranyl diphosphate synthases (pages 431–439)

      Rong Cao, Cammy K.-M. Chen, Rey-Ting Guo, Andrew H.-J. Wang and Eric Oldfield

      Version of Record online: 28 APR 2008 | DOI: 10.1002/prot.22066

    10. Predicting functional residues in Plasmodium falciparum plasmepsins by combining sequence and structural analysis with molecular dynamics simulations (pages 440–457)

      Pedro A. Valiente, Paulo R. Batista, Amaury Pupo, Tirso Pons, Alfonso Valencia and Pedro G. Pascutti

      Version of Record online: 28 APR 2008 | DOI: 10.1002/prot.22068

    11. Effect of lipid composition on buforin II structure and membrane entry (pages 480–491)

      Eleanor Fleming, Natalya P. Maharaj, Jessica L. Chen, Rachel B. Nelson and Donald E. Elmore

      Version of Record online: 1 MAY 2008 | DOI: 10.1002/prot.22074

    12. A molecular dynamics approach to study the importance of solvent in protein interactions (pages 515–525)

      Sergey Samsonov, Joan Teyra and M. Teresa Pisabarro

      Version of Record online: 1 MAY 2008 | DOI: 10.1002/prot.22076

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