Proteins: Structure, Function, and Bioinformatics

Cover image for Vol. 75 Issue 4

June 2009

Volume 75, Issue 4

Pages 787–1056

  1. Research Articles

    1. Top of page
    2. Research Articles
    3. Structure Notes
    1. Towards predicting Ca2+-binding sites with different coordination numbers in proteins with atomic resolution (pages 787–798)

      Xue Wang, Michael Kirberger, Fasheng Qiu, Guantao Chen and Jenny J. Yang

      Version of Record online: 30 SEP 2008 | DOI: 10.1002/prot.22285

    2. Comparison of the folding mechanism of highly homologous proteins in the lipid-binding protein family (pages 799–806)

      Ira J. Ropson, Joshua A. Boyer, Blake A. Schaeffer and Paula M. Dalessio

      Version of Record online: 30 SEP 2008 | DOI: 10.1002/prot.22286

    3. Spectroscopic and crystallographic studies of the mutant R416W give insight into the nucleotide binding traits of subunit B of the A1Ao ATP synthase (pages 807–819)

      Anil Kumar, Malathy Sony Subramanian Manimekalai, Asha Manikkoth Balakrishna, Cornelia Hunke, Sven Weigelt, Norbert Sewald and Gerhard Grüber

      Version of Record online: 3 OCT 2008 | DOI: 10.1002/prot.22289

    4. Analysis of nasturtium TmNXG1 complexes by crystallography and molecular dynamics provides detailed insight into substrate recognition by family GH16 xyloglucan endo-transglycosylases and endo-hydrolases (pages 820–836)

      Pekka Mark, Martin J. Baumann, Jens M. Eklöf, Fredrika Gullfot, Gurvan Michel, Åsa M. Kallas, Tuula T. Teeri, Harry Brumer and Mirjam Czjzek

      Version of Record online: 3 OCT 2008 | DOI: 10.1002/prot.22291

    5. Collective dynamics of the ribosomal tunnel revealed by elastic network modeling (pages 837–845)

      Ozge Kurkcuoglu, Zeynep Kurkcuoglu, Pemra Doruker and Robert L. Jernigan

      Version of Record online: 15 OCT 2008 | DOI: 10.1002/prot.22292

    6. Quantitative structure activity relationship of IA3-like peptides as aspartic proteinase inhibitors (pages 859–869)

      Juan Alexander Padrón-García, Manuel Alonso-Tarajano, Esther Alonso-Becerra, Tim J. Winterburn, Yasser Ruiz, John Kay and Colin Berry

      Version of Record online: 15 OCT 2008 | DOI: 10.1002/prot.22295

    7. High pressure reveals structural determinants for globin hexacoordination: Neuroglobin and myoglobin cases (pages 885–894)

      L. Capece, M. A. Marti, A. Bidon-Chanal, A. Nadra, F. J. Luque and D. A. Estrin

      Version of Record online: 15 OCT 2008 | DOI: 10.1002/prot.22297

    8. G protein inactive and active forms investigated by simulation methods (pages 919–930)

      Kamil Khafizov, Gianluca Lattanzi and Paolo Carloni

      Version of Record online: 21 OCT 2008 | DOI: 10.1002/prot.22303

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      Thermodynamics and dynamics of amyloid peptide oligomerization are sequence dependent (pages 954–963)

      Yan Lu, Philippe Derreumaux, Zhi Guo, Normand Mousseau and Guanghong Wei

      Version of Record online: 29 OCT 2008 | DOI: 10.1002/prot.22305

    10. Spontaneous β-helical fold in prion protein: The case of PrP(82-146) (pages 964–976)

      Gloria A.A. Saracino, Alessandra Villa, Giorgio Moro, Ugo Cosentino and Mario Salmona

      Version of Record online: 29 OCT 2008 | DOI: 10.1002/prot.22306

    11. Investigating the binding of β-1,4-galactan to Bacillus licheniformis β-1,4-galactanase by crystallography and computational modeling (pages 977–989)

      Jérôme Le Nours, Leonardo De Maria, Ditte Welner, Christel T. Jørgensen, Lars L. H. Christensen, Torben V. Borchert, Sine Larsen and Leila Lo Leggio

      Version of Record online: 4 NOV 2008 | DOI: 10.1002/prot.22310

    12. Intrinsic structural disorder of mouse proNGF (pages 990–1009)

      Francesca Paoletti, Sonia Covaceuszach, Peter V. Konarev, Stefania Gonfloni, Francesca Malerba, Elisabeth Schwarz, Dmitri I. Svergun, Antonino Cattaneo and Doriano Lamba

      Version of Record online: 4 NOV 2008 | DOI: 10.1002/prot.22311

    13. All-atom chain-building by optimizing MODELLER energy function using conformational space annealing (pages 1010–1023)

      Keehyoung Joo, Jinwoo Lee, Joo-Hyun Seo, Kyoungrim Lee, Byung-Gee Kim and Jooyoung Lee

      Version of Record online: 4 NOV 2008 | DOI: 10.1002/prot.22312

  2. Structure Notes

    1. Top of page
    2. Research Articles
    3. Structure Notes
    1. You have free access to this content
      Crystal structure of KaiC-like protein PH0186 from hyperthermophilic archaea Pyrococcus horikoshii OT3 (pages 1035–1039)

      Hee-Jin Kang, Keiko Kubota, Hua Ming, Ken-ichi Miyazono and Masaru Tanokura

      Version of Record online: 14 JAN 2009 | DOI: 10.1002/prot.22367

    2. You have free access to this content
      Crystal structure of human eIF5A1: Insight into functional similarity of human eIF5A1 and eIF5A2 (pages 1040–1045)

      Yufeng Tong, Isaac Park, Bum-Soo Hong, Lyudmila Nedyalkova, Wolfram Tempel and Hee-Won Park

      Version of Record online: 20 JAN 2009 | DOI: 10.1002/prot.22378

    3. You have free access to this content
      NMR-derived solution structure of SUMO from Drosophila melanogaster (dSmt3) (pages 1046–1050)

      Dinesh Kumar, Jyoti Ranjan Misra, Ashutosh Kumar, Jeetender Chugh, Shilpy Sharma and Ramakrishna V. Hosur

      Version of Record online: 2 FEB 2009 | DOI: 10.1002/prot.22389

    4. You have free access to this content
      Solution structure of the Escherichia coli HybE reveals a novel fold (pages 1051–1056)

      Xuan Shao, Jie Lu, Yunfei Hu, Bin Xia and Changwen Jin

      Version of Record online: 2 FEB 2009 | DOI: 10.1002/prot.22391

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