Proteins: Structure, Function, and Bioinformatics

Cover image for Vol. 80 Issue 5

May 2012

Volume 80, Issue 5

Pages 1259–1500

  1. Short Communication

    1. Top of page
    2. Short Communication
    3. Articles
    4. Structure Notes
    5. Erratum
    1. The ST pinch: A side chain-to-side chain hydrogen-bonded motif (pages 1259–1263)

      Martha G. Bomar, Upadhyayula S. Raghavender, Alexander W. I. Spindel, Krishna Kodukula and Amit K. Galande

      Version of Record online: 1 MAR 2012 | DOI: 10.1002/prot.24045

  2. Articles

    1. Top of page
    2. Short Communication
    3. Articles
    4. Structure Notes
    5. Erratum
    1. Massive conformation change in the prion protein: Using dual-basin structure-based models to find misfolding pathways (pages 1299–1307)

      Jesse P. Singh, Paul C. Whitford, N. R. Hayre, José Onuchic and Daniel L. Cox

      Version of Record online: 13 FEB 2012 | DOI: 10.1002/prot.24026

    2. Engineering proteins with enhanced mechanical stability by force-specific sequence motifs (pages 1308–1315)

      Wenzhe Lu, Surendra S. Negi, Andres F. Oberhauser and Werner Braun

      Version of Record online: 10 FEB 2012 | DOI: 10.1002/prot.24027

    3. Signaling pathway of a photoactivable Rac1-GTPase in the early stages (pages 1350–1362)

      Emanuel Peter, Bernhard Dick and Stephan A. Baeurle

      Version of Record online: 13 FEB 2012 | DOI: 10.1002/prot.24031

    4. Signatures of the ATP-binding pocket as a basis for structural classification of the serine/threonine protein kinases of gram-positive bacteria (pages 1363–1376)

      Natalia V. Zakharevich, Dmitry I. Osolodkin, Irena I. Artamonova, Vladimir A. Palyulin, Nikolay S. Zefirov and Valery N. Danilenko

      Version of Record online: 13 FEB 2012 | DOI: 10.1002/prot.24032

    5. Thermodynamic stability, unfolding kinetics, and aggregation of the N-terminal actin-binding domains of utrophin and dystrophin (pages 1377–1392)

      Surinder M. Singh, Justine F. Molas, Narsimulu Kongari, Swati Bandi, Geoffrey S. Armstrong, Steve J. Winder and Krishna M. G. Mallela

      Version of Record online: 17 FEB 2012 | DOI: 10.1002/prot.24033

    6. The binding affinities of proteins interacting with the PDZ domain of PICK1 (pages 1393–1408)

      Ashini Bolia, Z. Nevin Gerek, Ozlem Keskin, Sefika Banu Ozkan and Kumlesh K. Dev

      Version of Record online: 24 FEB 2012 | DOI: 10.1002/prot.24034

    7. Molecular modeling of hair keratin/peptide complex: Using MM-PBSA calculations to describe experimental binding results (pages 1409–1417)

      Nuno G. Azoia, Margarida M. Fernandes, Nuno M. Micaêlo, Cláudio M. Soares and Artur Cavaco-Paulo

      Version of Record online: 1 MAR 2012 | DOI: 10.1002/prot.24037

    8. A synthetic hexapeptide designed to resemble a proteinaceous p-loop nest is shown to bind inorganic phosphate (pages 1418–1424)

      Antonio Bianchi, Claudia Giorgi, Paolo Ruzza, Claudio Toniolo and E. James Milner-White

      Version of Record online: 1 MAR 2012 | DOI: 10.1002/prot.24038

    9. Structural features that predict real-value fluctuations of globular proteins (pages 1425–1435)

      Michal Jamroz, Andrzej Kolinski and Daisuke Kihara

      Version of Record online: 13 FEB 2012 | DOI: 10.1002/prot.24040

    10. Crystal structure and biochemical properties of putrescine carbamoyltransferase from Enterococcus faecalis: Assembly, active site, and allosteric regulation (pages 1436–1447)

      Dashuang Shi, Xiaolin Yu, Gengxiang Zhao, Jeremy Ho, Shennon Lu, Norma M. Allewell and Mendel Tuchman

      Version of Record online: 13 FEB 2012 | DOI: 10.1002/prot.24042

    11. Recognition between a short unstructured peptide and a partially folded fragment leads to the thioredoxin fold sharing native-like dynamics (pages 1448–1464)

      Andrés Binolfi, Claudio O. Fernández, Mauricio P. Sica, José M. Delfino and Javier Santos

      Version of Record online: 1 MAR 2012 | DOI: 10.1002/prot.24043

  3. Structure Notes

    1. Top of page
    2. Short Communication
    3. Articles
    4. Structure Notes
    5. Erratum
    1. NMR-based insights into the conformational and interaction properties of Arkadia RING-H2 E3 Ub ligase (pages 1484–1489)

      Christos T. Chasapis, Nikolaos G. Kandias, Vasso Episkopou, Detlef Bentrop and Georgios A. Spyroulias

      Version of Record online: 13 MAR 2012 | DOI: 10.1002/prot.24048

    2. Fold of the conserved DTC domain in deltex proteins (pages 1495–1499)

      Josiah Obiero, John R. Walker and Sirano Dhe-Paganon

      Version of Record online: 13 MAR 2012 | DOI: 10.1002/prot.24054

  4. Erratum

    1. Top of page
    2. Short Communication
    3. Articles
    4. Structure Notes
    5. Erratum
    1. You have free access to this content
      Erratum: Conformational dynamics of capping protein and interaction partners: Simulation studies (page 1500)

      Suryani Lukman, Robert C. Robinson, David Wales and Chandra S. Verma

      Version of Record online: 5 APR 2012 | DOI: 10.1002/prot.24064

      This article corrects:

      Conformational dynamics of capping protein and interaction partners: Simulation studies

      Vol. 80, Issue 4, 1066–1077, Version of Record online: 18 JAN 2012

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