The regioisomers (sn-ABA/sn-AAB) of four triacylglycerols (TAGs), 18:2/18:2/18:1 (LLO), 18:2/18:1/18:1 (LOO), 16:0/18:1/18:1 (POO), and 16:0/16:0/18:1 (PPO), were quantified in lard, rapeseed oil, and sunflower seed oil by three different mass spectrometric methods using liquid chromatography (LC) and two different mass spectrometers. The ionization methods used were positive ion atmospheric pressure chemical ionization (APCI), positive ion electrospray ionization (ESI), and negative ion chemical ionization (NICI) with ammonia as the reagent gas. The LC/APCI-MS results with two different instrumentation types, LC/ESI-MS/MS and direct inlet ammonia NICI-MS/MS, were compared. The LC/APCI-MS method is based on the preferential formation of diacylglycerol (DAG) fragment ions during ionization by loss of sn-1/3 fatty acids from [M+H]+ ions. Similar formation of the DAG ions from [M+NH4]+ ions by collision-induced dissociation (CID) in the LC/ESI-MS/MS method and the [M−HRCOOH−100]− ions from [M−H]− ions by CID in the direct inlet ammonia NICI-MS/MS method is observed. These methods were found to be useful and reliable in determining the regioisomeric structure of TAGs. No statistically significant differences were found between the results obtained with these methods. For LLO, LOO, and POO the proportions of sn-ABA isomer calculated from the results from all four methods were in rapeseed oil 7.7 ± 6.5, 57.9 ± 3.3, and 4.5 ± 6.1%, respectively, and in sunflower seed oil 12.2 ± 6.9, 34.0 ± 5.2, and 1.4 ± 2.8%, respectively. The proportions of ABA of POO and PPO in lard were 95.3 ± 3.2 and 4.9 ± 5.6%, respectively. This study also proved that the LC/APCI-MS/MS method examined is not applicable in the quantification of TAG regioisomers because the formation of DAG ions is not clearly dependent on the positional distribution of the fatty acids. Copyright © 2007 John Wiley & Sons, Ltd.