Apoptosis or programmed cell death is a series of defined cellular events that culminates in the efficient removal of the cell and its contents [38]. The original definition of apoptosis states that this form of cell death does not inaugurate an inflammatory response [38]. However, recently this classic definition has been revised as apoptosis in certain situations, such as pathogen invasion, can induce an inflammatory response, which may promote the activation of an immune response [39].
Apoptosis is characterized by several morphological changes, including cytoskeleton disruption, condensation of the cytoplasm and chromatin, membrane blebbing, loss of mitochondrial function, fragmentation of DNA into 180 base pair oligomers and ultimately the formation of small membrane bound particles known as apoptotic bodies, which in vivo are rapidly cleared by phagocytic cells such as macrophages [38]. Apoptosis can be triggered via one of several pathways, dependent on the initial stimulus. Many of these pathways involve receptor stimulation, activation of the protein kinase/phosphatase cascade [including tyrosine kinases, serine/threonine kinases, mitogen activated kinases (MAP) and protein kinase R (PKR)] and the release of secondary messengers, which act as positive or negative transcription factors for specific genes (see Fig. 2). Another common event in most of these pathways is the activation of a set of cysteine proteases (caspases). Caspases can be separated into two groups, the initiator caspases (caspases-8, -9, -10 and -12) and the effector caspases (caspases-1, -3, -6 and -7). The initiator caspases are recruited to death receptors or other cytoplasmic adaptor molecules and become activated by proteolytic cleavage. These active caspases initiate a caspase cascade resulting in the activation of the effector caspases. The effector caspases cleave a whole range of proteases and nucleases that mediate the morphological transition seen in apoptotic cells [40]. For comprehensive reviews of apoptosis signalling pathways, see [41,42]
3.1.1Mechanisms of influenza virus-induced apoptosis
Influenza virus induces apoptosis in a variety of cell types both in vitro and in vivo [43–48]. However, the precise mechanism of virus-induced apoptosis is unclear. One of the major problems elucidating the pathways involved is the large number of cell types being studied, as the apoptotic response can depend on cell type and activation stimulus. Furthermore, many of the pathways activated are not mutually exclusive; the initiation of one pathway can induce multiple signal transduction cascades through feedback loops [49]. However, regardless of the pathways triggered, the final outcome of the apoptotic response appears to be universal (Fig. 2).
PKR is a key regulatory component in many apoptotic pathways [50] and is induced by IFN and activated by dsRNA. Activated PKR has been detected in a number of different cell types infected with influenza virus [51–54]. Activation of PKR leads to several sequential downstream events including phosphorylation of eukaryotic initiation factor (eIF)-2, activation of Nuclear Factor (NF)-κB and transcriptional induction of numerous pro-apoptotic genes including those encoding Fas, p53 and Bax [52,55]. Active PKR, by an unknown mechanism, also results in the recruitment of caspase-8 by the cytoplasmic protein Fas associated death domain (FADD). This results in the initiation of a caspase cascade, which includes the activation of caspase-9 [55,56]. Influenza virus-induced apoptosis in murine 3T3 cells and MDCK cells correlates with upregulated expression of Fas [57,58]. In addition, the initiator caspase, caspase-8 and effector caspase, caspase-3, are activated during infection of these cells [59]. The anti-apoptotic mitochondrial protein, Bcl-2, has been shown to inhibit virus-induced apoptosis in MDCK cells [60] indicating mitochondrial dysfunction may occur after activation of caspase-8, thus augmenting the caspase cascade. Together these data suggest that virus-induced apoptosis is, at least in part, mediated via the formation of a FADD/caspase-8 complex by PKR, which initiates a caspase cascade, independently of Fas [52]. However, treating infected cells with antibodies directed towards Fas Ligand (FasL) partially inhibits the induction of apoptosis [61] indicating Fas may also be involved in viral induced apoptosis, perhaps by a secondary mechanism. The level of FasL expressed on the cell surface is also upregulated in these cells [61], and may play an additional role in the induction of apoptosis.
Studies using equine influenza virus have shown that influenza virus infection of MDCK cells induces apoptosis via a stress-activated pathway [62]. Transforming growth factor (TGF)-β, upregulated in infected cells, initiates either a c-Jun N-terminal kinase (JNK) or stress activated protein kinase (SAPK) cascade, which modulates the activity of the apoptosis-promoting regulatory factor c-Jun/AP-1 [62,63]. Viral neuraminidase activates latent TGF-β and influenza virus-induced apoptosis of MDCK cells is partially inhibited by TGF-β-specific antibodies [64] providing further evidence for the role of TGF-β in virus-induced apoptosis. These latter studies were performed using avian and human influenza viruses indicating that the TGF-β pathway is not dependent on strain. This pathway is not limited to MDCK cells; TGF-β activation has been implicated in the apoptosis of lymphocytes and thus lymphopenia observed during acute infection [65].
Recent studies have shown that caspase-8 activation is the predominant apoptotic pathway in human bronchiolar cells [66]. There is no evidence for the role of the mitochondria in this pathway, as caspase-9 is not activated. However, when cells are treated with the caspase-8 inhibitor Z-IETD-fmk complete inhibition of apoptosis is not achieved [66] indicating the involvement of a second pathway during viral induced apoptosis of bronchiolar cells. This caspase-8 independent pathway is mediated via the activation of apoptosis signal-regulating kinase (ASK)-1, which triggers a phosphorylation cascade [67]. Endoplasmic reticulum (ER) stress, due to the over expression of viral glycoproteins, induces this signal transduction pathway through the formation of an IFN response element-1(IRE-1)–TNF receptor-associated factor 2 (TRAF2)–ASK1 complex [67]. The activation of PKR may also potentiate this system, by direct activation of ASK-1 [68].
Lung tissue injury, following influenza virus infection, has been associated with cellular oxidative stress and reactive oxygen species (ROS) generation [69]. There is also evidence for the induction of nitric oxide synthase (NOS)-2 in human airway epithelium, by dsRNA dependent-PKR [54]. This leads to the formation of toxic reactive nitrogen intermediates. Oxidative stress of infected cells leads to the activation of the transcriptional regulatory proteins, activating protein (AP)-1, C/EBP, and NF-κB [70], all of which are potential pro-apoptotic and/or pro-inflammatory regulators. However, anti-oxidants had little effect on the level of apoptosis induced in the bronchiolar cell line NCI-H292 [66]. In contrast, we have found that ROS generation is the predominant pathway in human nasal cells (E. Brydon, unpublished observation). ROS and free radicals usually act by causing mitochondria membrane dysfunction, resulting in the release of cytochrome c and consequently caspase-9 activation [71]. However, caspase-9 is not activated in influenza virus-infected nasal cells (E. Brydon, unpublished observation). Studies using the human embryonic kidney cell line HEK293 have shown over expression of M, HA or NP generates ROS, which leads to IκB kinase (IKK) expression and ultimately NF-κB activation [72]. These results indicate nasal cell apoptosis may involve transcriptional activation of cellular oxidative stress genes and a direct attack on DNA integrity by ROS. However, the role of oxygen radicals in activation of NF-κB has been questioned; they may be cell and/or stimulus specific, acting as facilitators rather than causatively [73]. A caspase-8 signalling cascade may also be involved in virus-induced apoptosis of nasal cells, as low levels of caspase-8 were detected in infected cells. However, the overall contribution of caspase-8 to influenza virus-induced apoptosis in this cell type is unclear (E. Brydon, unpublished observation).
Many of the apoptotic pathways described above result in the activation of transcription factors such as AP-1 and NF-κB, which are known to regulate the expression of several cytokines and chemokines. Thus, the activation of these transcription factors provides a direct link between apoptosis, cytokine expression and inflammation.
3.1.2Apoptosis and virus replication
It has been postulated that the induction of apoptosis is a host defence mechanism, stopping the replication and spread of virus. However, inhibiting influenza virus-induced apoptosis by Bcl-2 expression reduces virus yield, spread and HA glycosylation [60]. Furthermore, caspase-3 activation is essential for efficient virus replication as is the induction of the pro-apoptotic factors TRAIL and FasL by NF-κB [74,75]. In contrast, it has been suggested that influenza virus may avoid the possible anti-viral properties of apoptosis through rapid multiplication as apoptosis was only observed after virus had replicated [76]. This may be virus strain or cell dependent, as caspase inhibitors did not affect virus replication in human bronchiolar cells (E. Brydon, unpublished observations). In addition, some viruses that replicate well in tissue culture cells induce only low levels of caspase 3 and apoptosis in MDCK cells [77; S. Morris, unpublished observations].
3.1.3Nature of the influenza virus component involved in induction/inhibition of apoptosis
The downstream pathways of molecular signalling after influenza virus infection are subject to intense research at present (see above). However, the upstream signalling events and what it is specifically that initiates these responses is less clear. It is likely that apoptosis induction is multifactorial and highly regulated, as influenza virus strains have been shown to differ in their ability to induce apoptosis [78,79]. In addition, the multiple pathways discussed above, many of which appear to be cell type specific, may be initiated by different viral components. Several proteins have been reported to play a role in influenza virus-induced apoptosis. However, many of these proteins have been identified using a single protein expression approach that may not reflect events during infection.
The viral NA was the first influenza virus protein shown to have a role in the induction of apoptosis [64,78,80]. It can activate latent TGF- β at the cell surface by facilitating cleavage of TGF-β into its active form. However, NA is not the sole contributor to apoptosis as UV-irradiated virus, which retains 100% NA activity, induced only low levels of apoptosis [80]. Similarly, ammonium chloride, used to prevent virus entry, and amantadine, which inhibits virus uncoating, reduced virus-induced apoptosis [80]. The requirement for endosome acidification in apoptosis induction is interesting in the light of recent observations that ssRNA and influenza virus may interact with Toll-like receptor 7 to initiate IFN responses and this may be blocked by neutralisation of endosome acidification [81]. As described above dsRNA may also induce apoptosis.
The M1 matrix protein has been shown to have some amino acid similarity to protease inhibitors, specifically a motif between residues 18-22 that bore a structural resemblance to the active site of aprotinin. Subsequently a protease-binding domain in the N-terminal region of M1 was defined [82] suggesting that it might bind caspases. Indeed, M1 binds to caspase-8, and weakly to caspase-7. How it functions in this complex is not yet known but it may be an influenza virus-encoded inhibitor of caspase-8. However, caspase-8 activation does occur in virus-infected MDCK epithelial cells and 3T3 fibroblasts [59,83] so the ability of M1 to bind and inhibit caspase-8 activation may vary between strains or be regulated by another, as yet unidentified, factor. In contrast, both M1 and M2 expressed individually from plasmids induced apoptosis [78].
Until recently, it was thought that influenza A viruses encoded only 10 proteins from 8 RNA segments. During experiments characterising the viral proteins recognised by mouse CD8+ T cells, Chen and colleagues [84] serendipitously discovered a small protein encoded by an alternative +1 reading frame in the PB1 protein. The protein localises to mitochondria where it permeabilises and destabilises the mitochondrial membrane leading to leakage of cytochrome c[85]. Monocytes, but not fibroblast or epithelial cell lines, expressing PB1-F2 underwent apoptosis. The suggestion is that this protein targets leucocytes to undergo apoptosis, possibly resulting in the lymphopoenia often seen in influenza [84].
The non-structural 1 protein (NS1), like M1, induces apoptosis when expressed from a plasmid in the absence of the other viral proteins [78]. In addition, the NS1 protein shows approximately 50% of structural homology to the pro-apoptotic Fas receptor [86]. However, these results may be aberrant of the situation during viral infection, as the NS1 protein has recently been shown to downregulate influenza virus-induced apoptosis as apoptosis increased in cells infected with an NS1 deletion mutant [87]. This is possibly through its capacity to inhibit type 1 IFN production [88], which potentiates virus-induced apoptosis [57], or through competing with Fas due to their structural homology. NS1 also inhibits activation of transcription factors such as NF-κB [89] and JNK/AP-1 [90]. Recently we have shown, using reverse genetics, that the NS RNA segment 8 derived from a poor apoptosis-inducing virus, converted a virus that induced high levels of apoptosis into a poor apoptosis-inducing virus. Furthermore, RNA segment 8 from the good inducer enhanced apoptosis induced by the poor inducer (S. Morris, unpublished observations). Whether this is due to the NS1 or NS2 protein is presently unknown but illustrates the need to use different strains in such investigations.