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REFERENCES

  • Amann, R.I., Ludwig, W., Schleifer, K.-H. (1995) Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiological Review 59 (1), 143 169.
  • Carpenter-Boggs, L., Kennedy, A.C., Reganold, J.P. (1998) Use of phospholipid fatty acids and carbon source utilization patterns to track microbial community succession in developing compost. Applied Environmental Microbiology 64 (10), 4062 4064.
  • Collins, M.D., Lawson, P.A., Willems, A., Cordoba, J.J., Fernandez-Garayzabal, J., Garcia, P., Cai, J., Hippe, H., Farrow, J.A.E. (1994) The phylogeny of the genus Clostridium: proposal of five new genera and eleven new species combination. International Journal of Systematic Bacteriology 44 (4), 812 826.
  • Farrelly, V., Rainey, F.A., Stackebrandt, E. (1995) Effect of genome size and rrn gene copy number on PCR amplification of 16S rRNA genes from a mixture of bacterial species. Applied Environmental Microbiology 61 (7), 2798 2801.
  • Ferris, M.J., Nold, S.C., Revsbech, N.P., Ward, D.M. (1997) Population structure and physiological changes within a hot spring microbial mat community following disturbance. Applied Environmental Microbiology 63 (4), 1367 1374.
  • Finstein, M.S. & Morris, M.L. (1975) Microbiology of municipal solid waste composting. Advances in Applied Microbiology 19, 113 151.
  • Forsyth, W.G.C. & Webley, D.M. (1948) The microbiology of composting II.—A study of the aerobic thermophilic flora developing in grass composts. Proceedings of the Society of Applied Bacteriology 11, 34 39.
  • Fox, G.E., Wisotzkey, J.D., Jurtshuk, J.R.P. (1992) How close is clone: 16S RNA sequence identity may not be sufficient to guarantee species identity. International Journal of Systematic Bacteriology 42, 166 170.
  • Godden, B., Penninckx, M., Piérard, A., Lannoye, R. (1983) Evolution of enzyme activities and microbial populations during composting of cattle manure. European Journal of Applied Microbiological Biotechnology 17, 306 310.
  • Golueke, C.G., Card, B.J., McGauhey, P.H. (1954) A critical evaluation of inoculums in composting. Applied Microbiology 2, 44 53.
  • Gray, K.R., Sherman, K., Biddlestone, A.J. (1971) A review of composting—part 1. Process Biochemistry 6, 32 36.
  • Griffin, D.M. (1985) A comparison of the roles of bacteria and fungi. In Bacteria in Nature ed. Leadbetter, E.R. and Poindexter, J.S. pp. 221 255. New York: Plenum Press.
  • Hellmann, B., Zelles, L., Palojärvi, A., Bai, Q. (1997) Emission of climate-relevant trace gases and succession of microbial communities during open-windrow composting. Applied Environmental Microbiology 63 (3), 1011 1018.
  • Herrmann, R_f. & Shann, J_f. (1997) Microbial community change during the composting of municipal solid waste. Microbial Ecology 33, 78 85.
  • Kane, B.E. & Mullins, J.T. (1973) Thermophilic fungi in a municipal waste compost system. Mycologia 65, 1087 1100.
  • Klamer, M. & Bååth, E. (1998) Microbial community dynamics during composting of straw material studied using phospholipid fatty acid analysis. FEMS Microbiological Ecology 27, 9 20.
  • Macauley, B.J., Stone, B., Iiyama, K., Harper, E.R., Miller, F.C. (1993) Compost research runs ‘hot’ and ‘cold’ at La Trobe University. Compost Science Utilitization 1, 6 12.
  • McKinley, V.L. & Vestal, J.R. (1984) Biokinetic analyses of adaptation and succession: microbial activity in composting municipal sewage sludge. Applied Environmental Microbiology 47 (5), 933 941.
  • Miller, F.C. (1996) Composting of municipal solid waste and its components. In Microbiology of Solid Waste ed. Palmisano, A.C. and Barlaz, M.A. pp. 115 154. New York: CRC Press.
  • Muyzer, G., Brinkhoff, T., Nübel, U., Santegoeds, C., Schäfer, H., Wawer, C. (1997) Denaturing gradient gel electrophoresis (DGGE) in microbial ecology. In Molecular Microbial Ecology Manual pp. 1 27. Netherlands: Kluwer Academic Publishers.
  • Muyzer, G., Waal, E.C.D., Uitterlinden, A.G. (1993) Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Applied Environmental Microbiology 59 (3), 695 700.
  • Øvreås, L., Forney, L., Daae, F.L., Torsvik, V. (1997) Distribution of bacterioplankton in meromictic lake sælenvannet, as determined by denaturing gradient gel electrophoresis of PCR-amplified gene fragments coding for 16S rRNA. Applied Environmental Microbiology 63 (9), 3367 3373.
  • Page, R.D.M. (1996) TREEVIEW: an application to display phylogenetic trees on personal computers. Computer Application in the Bioscience 12, 357 358.
  • Polz, M_f. & Cavanaugh, C.M. (1998) Bias in template-to-product ratios in multitemplate PCR. Applied Environmental Microbiology 64 (10), 3724 3730.
  • Riffaldi, R., Levi-Minzi, R., Pera, A., Bertoldi, M.D. (1986) Evaluation of compost maturity by means of chemical and microbial analyses. Waste Management and Research 4, 387 396.
  • Saitou, N. & Nei, M. (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biological Evolution 4, 406 425.
  • Scott, W.J. (1957) Water relations of food spoilage microorganisms. Advances in Food Research 7, 83 127.
  • Selenska, S. & Klingmüller, W. (1991) DNA recovery and direct detection of Tn5 sequences from soil. Letters in Applied Microbiology 13, 21 24.
  • Shilesky, D.M. & Maniotis, J. (1969) Mycology of composting. Compost Science 9, 20 23.
  • Smith, T_f. & Waterman, M. (1981) Identification of common molecular subsequences. Journal of Molecular Biology 147, 195 197.
  • Sneath, P.H.A., Mair, N.S., Sharpe, M.E., Holt, J.G. (1986) Bergey's Manual of Systematic Bacteriology, Vol. 2. Baltimore: William & Wilkins.
  • Strom, P_f. (1985a) Effect of temperature on bacterial species diversity in thermophilic solid-waste composting. Applied Environmental Microbiology 50 (4), 899 905.
  • Strom, P_f. (1985b) Identification of thermophilic bacteria in solid-waste composting. Applied Environmental Microbiology 50 (4), 906 913.
  • Suzuki, M.T. & Giovannoni, S.J. (1996) Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR. Applied Environmental Microbiology 62 (2), 625 630.
  • Thompson, J.D., Higgins, D.G., Gibson, T.J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22 (22), 4673 4680.
  • Webley, D.M. (1947a) Activity of thermophilic bacteria in compost of fresh green material. Nature 35, 4027.
  • Webley, D.M. (1947b) The microbiology of composting 1. The behavior of the aerobic mesophilic bacterial flora of composts and its relation to other changes taking place during composting. Proceedings of the Society of Applied Bacteriology10, 83 89.
  • Woese, C.R. (1987) Bacterial evolution. Microbiological Review 51 (2), 221 271.