SEARCH

SEARCH BY CITATION

References

  • Altuvia, S., Weinstein-Fischer, D., Zhang, A., Postow, L. & Storz, G. (1997) A small, stable RNA induced by oxidative stress: role as a pleiotropic regulator and antimutator. Cell 90: 4353.
  • Altuvia, S., Zhang, A., Argaman, L., Tiwari, A. & Storz, G. (1998) The Escherichia coli OxyS regulatory RNA represses fhlA translation by blocking ribosome binding. EMBO J 17: 60696075.DOI: 10.1093/emboj/17.20.6069
  • Atlung, T. & Ingmer, H. (1997) H-NS: a modulator of environmentally regulated gene expression. Mol Microbiol 24: 717.
  • Azam, T.A. & Ishihama, A. (1999) Twelve species of the nucleoid-associated protein from Escherichia coli. Sequence recognition specificity and DNA binding affinity. J Biol Chem 274: 3310533113.
  • Azam, T.A., Iwata, A., Nishimura, A., Ueda, S. & Ishihama, A. (1999) Growth phase-dependent variation in protein composition of the Escherichia coli nucleoid. J Bacteriol 181: 63616370.
  • Brown, L. & Elliott, T. (1997) Mutations that increase expression of the rpoS gene and decrease its dependence on hfq function in Salmonella typhimurium. J Bacteriol 179: 656662.
  • Clodi, E., Semrad, K. & Schroeder, R. (1999) Assaying RNA chaperone activity in vivo using a novel RNA folding trap. EMBO J 18: 37763782.DOI: 10.1093/emboj/18.13.3776
  • Cusick, M.E. & Belfort, M. (1998) Domain structure and RNA annealing activity of Escherichia coli regulatory protein StpA. Mol Microbiol 28: 847857.DOI: 10.1046/j.1365-2958.1998.00848.x
  • Delihas, N. (1995) Regulation of gene expression by trans-encoded antisense RNAs. Mol Microbiol 15: 411414.
  • Eddy, S. (1999) Noncoding RNA genes. Curr Opin Genet Dev 9: 695699.DOI: 10.1016/s0959-437x(99)00022-2
  • Gesteland, R.F., Cech, T.R. & Atkins, J.F. (1999) The RNA World. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press, pp. 1709.
  • Hengge-Aronis, R. (1996) Back to log phase: σs as a global regulator in the osmotic control of gene expression in Escherichia coli. Mol Microbiol 21: 887893.
  • Herschlag, D. (1995) RNA chaperones and the RNA folding problem. J Biol Chem 270: 2087120874.
  • Inouye, M. & Delihas, N. (1988) Small RNAs in the prokaryotes: a growing list of diverse roles. Cell 53: 57.
  • Klauck, E., Bohringer, J. & Hengge-Aronis, R. (1997) The LysR-like regulator LeuO in Escherichia coli is involved in the translational regulation of rpoS by affecting the expression of the small regulatory DsrA-RNA. Mol Microbiol 25: 559569.
  • Kushner, S.R. (1996) mRNA decay. In Escherichia coli and Salmonella: Cellular, Molecular Biology. Neidhardt, F.C., Curtiss, R., III, Ingraham, J.L., Lin, E.C.C., Low, K.B., Magasanik, B., et al. (eds). Washington, DC: American Society for Microbiology Press, pp. 849860.
  • Lease, R. & Belfort, M. (2000) A trans-acting RNA as a control switch in Escherichia coli: DsrA RNA modulates function by forming alternative structures. Proc Natl Acad Sci USA 97: 99199924 .
  • Lease, R.A., Cusick, M.E. & Belfort, M. (1998) Riboregulation in Escherichia coli: DsrA RNA acts by RNA–RNA interactions at multiple loci. Proc Natl Acad Sci USA 95: 1245612461.DOI: 10.1073/pnas.95.21.12456
  • Loewen, P.C. & Hengge-Aronis, R. (1994) The role of the sigma factor σs (KatF) in bacterial global regulation. Annu Rev Microbiol 48: 5380.
  • Majdalani, M., Cunning, C., Sledjeski, D., Elliot, R. & Gottesman, S. (1998) DsrA RNA regulates translation of RpoS message by an anti-antisense mechanism, independent of its action as an antisilencer of transcription. Proc Natl Acad Sci USA 95: 1246212467.DOI: 10.1073/pnas.95.21.12462
  • Muffler, A., Traulsen, D.D., Fischer, D., Lange, R. & Hengge-Aronis, R. (1997) The RNA-binding protein HF-I plays a global regulatory role which is largely, but not exclusively, due to its role in expression of the sigmaS subunit of RNA polymerase in Escherichia coli. J Bacteriol 179: 297300.
  • Romeo, T. (1998) Global regulation by the small RNA-binding protein CsrA and the non-coding RNA molecule CsrB. Mol Microbiol 29: 13211330.
  • Rozanov, D.V., D'Ari, R. & Sineoky, S.P. (1998) RecA-independent pathways of lambdoid prophage induction in Escherichia coli. J Bacteriol 180: 63066315.
  • Schuppli, D., Miranda, G., Tsui, H.-C.T., Winkler, M.E., Sogo, J.M. & Weber, H. (1997) Altered 3′-terminal RNA structure in phage Qβ adapted to host factor-less Escherichia coli. Proc Natl Acad Sci USA 94: 1023910242.DOI: 10.1073/pnas.94.19.10239
  • Sledjeski, D. & Gottesman, S. (1995) A small RNA acts as an antisilencer of the H-NS-silenced rcsA gene of Escherichia coli. Proc Natl Acad Sci USA 92: 20032007.
  • Sledjeski, D.D., Gupta, A. & Gottesman, S. (1996) The small RNA, DsrA, is essential for the low temperature expression of RpoS during exponential growth in Escherichia coli. EMBO J 15: 39934000.
  • Sonden, B. & Uhlin, B.E. (1996) Coordinated and differential expression of histone-like proteins in Escherichia coli: regulation and function of the H-NS analog StpA. EMBO J 15: 49704980.
  • Tsui, H.-C.T., Feng, G. & Winkler, M.E. (1997) Negative regulation of mutS and mutH repair gene expression by the Hfq and RpoS global regulators of Escherichia coli K-12. J Bacteriol 179: 74767487.
  • Wassarman, K.M., Zhang, A. & Storz, G. (1999) Small RNAs in Escherichia coli. Trends Microbiol 7: 3745.DOI: 10.1016/s0966-842x(98)01379-1
  • Williams, R.M. & Rimsky, S. (1997) Molecular aspects of the E. coli nucleoid protein H-NS: a central controller of gene regulatory networks. FEMS Microbiol Lett 156: 175185.DOI: 10.1016/s0378-1097(97)00397-2
  • Zhang, A., Derbyshire, V., Salvo, J.L. & Belfort, M. (1995) Escherichia coli protein StpA stimulates self-splicing by promoting RNA assembly in vitro. RNA 1: 783793.
  • Zhang, A., Rimsky, S., Reaban, M.E., Buc, H. & Belfort, M. (1996) Escherichia coli protein analogs StpA and H-NS: regulatory networks, similar and disparate effects on nucleic acid dynamics. EMBO J 15: 13401349.
  • Zhang, A., Altuvia, S., Tiwari, A., Argaman, L., Hengge-Aronis, R. & Storz, G. (1998) The OxyS regulatory RNA represses rpoS translation and binds the Hfq (HF-I) protein. EMBO J 17: 60616068.DOI: 10.1093/emboj/17.20.6061