SEARCH

SEARCH BY CITATION

References

  • Bae, W., Jones, P.G. & Inouye, M. (1997) CspA, the major cold shock protein of Escherichia coli, negatively regulates its own gene expression. J Bacteriol 179: 70817088.
  • Bae, W., Xia, B., Inouye, M. & Severinov, K. (2000) Escherichia coli CspA-family RNA chaperones are transcription antiterminators. Proc Natl Acad Sci USA 97: 77847789.DOI: 10.1073/pnas.97.14.7784
  • Brandi, A., Pietroni, P., Gualerzi, C.O. & Pon, C.L. (1996) Post-transcriptional regulation of CspA expression in Escherichia coli. Mol Microbiol 19: 231240.
  • Brandi, A., Spurio, R., Gualerzi, C.O. & Pon, C.L. (1999) Massive presence of the Escherichia coli‘major cold-shock protein’ CspA under non-stress conditions. EMBO J 18: 16531659.DOI: 10.1093/emboj/18.6.1653
  • Carpousis, A.J., Van Houwe, G., Ehretsmann, C. & Krisch, H.M. (1994) Copurification of E. coli RNase E and PNPase: evidence for a specific association between two enzymes important in RNA processing and degradation. Cell 76: 889900.
  • Coburn, G.A. & Mackie, G.A. (1999) Degradation of mRNA in Escherichia coli: an old problem with some new twists. Prog Nucleic Acid Res Mol Biol 62: 55108.
  • Coburn, G.A., Miao, X., Briant, D.J. & Mackie, G.A. (1999) Reconstitution of a minimal RNA degradosome demonstrates functional coordination between a 3′ exonuclease and a DEAD-box RNA helicase. Genes Dev 13: 25942603.DOI: 10.1101/gad.13.19.2594
  • Court, D.L. (1993) RNA processing and degradation by RNase III. In Control of Messenger RNA Stability. Belasco, J.G., and Brawerman, G. (eds). San Diego: Academic Press, pp. 71116.
  • Dammel, C.S. & Noller, H.F. (1995) Suppression of a cold-sensitive mutation in 16S rRNA by overexpression of a novel ribosome-binding factor, RbfA. Genes Dev 9: 626637.DOI: 10.1101/gad.9.5.626
  • Evans, S. & Dennis, P.P. (1985) Promoter activity and transcript mapping in the regulatory region for genes encoding ribosomal protein S15 and polynucleotide phosphorylase of Escherichia coli. Gene 40: 1522.
  • Fang, L., Jiang, W., Bae, W. & Inouye, M. (1997) Promoter-independent cold-shock induction of cspA and its derepression at 37 degrees Celsius by mRNA stabilization. Mol Microbiol 23: 355364.
  • Farewell, A. & Neidhardt, F.C. (1998) Effect of temperature on in vivo protein synthetic capacity in Escherichia coli. J Bacteriol 180: 47044710.
  • Goldenberg, D., Azar, I. & Oppenheim, A.B. (1996) Differential mRNA stability of the cspA gene in the cold-shock response of Escherichia coli. Mol Microbiol 19: 241248.
  • Goldenberg, D., Azar, I., Oppenheim, A.B., Brandi, A., Pon, C.L. & Gualerzi, C.O. (1997) Role of Escherichia coli cspA promoter sequences and adaptation of translational apparatus in the cold shock response. Mol Gen Genet 256: 282290.DOI: 10.1007/s004380050571
  • Goldstein, J., Pollitt, N.S. & Inouye, M. (1990) Major cold shock protein of Escherichia coli. Proc Natl Acad Sci USA 87: 283287.
  • Goverde, R.L., Huis, I.V., Kusters, J.G. & Mooi, F.R. (1998) The psychrotrophic bacterium Yersinia enterocolitica requires expression of pnp, the gene for polynucleotide phosphorylase, for growth at low temperature (5 degrees C). Mol Microbiol 28: 555569.
  • Graumann, P. & Marahiel, M.A. (1996) Some like it cold: response of microorganisms to cold shock. Arch Microbiol 166: 293300.DOI: 10.1007/s002030050386
  • Greenblatt, J., McLimont, M. & Hanly, S. (1981) Termination of transcription by nusA gene protein of Escherichia coli. Nature 292: 215220.
  • Hajnsdorf, E., Carpousis, A.J. & Regnier, P. (1994) Nucleolytic inactivation and degradation of the RNase III processed pnp message encoding polynucleotide phosphorylase of Escherichia coli. J Mol Biol 239: 439454.DOI: 10.1006/jmbi.1994.1387
  • Johnstone, B.H., Handler, A.A., Chao, D.K., Nguyen, V., Smith, M. & Ryu, S.Y., et al. (1999) The widely conserved Era G-protein contains an RNA-binding domain required for Era function in vivo. Mol Microbiol 33: 11181131.
  • Jones, P.G., Van Bogelen, R.A. & Neidhardt, F.C. (1987) Induction of proteins in response to low temperature in Escherichia coli. J Bacteriol 169: 20922095.
  • Jones, P.G. & Inouye, M. (1994) The cold-shock response – a hot topic. Mol Microbiol 11: 811818.
  • Jones, P.G. & Inouye, M. (1996) RbfA, a 30S ribosomal binding factor, is a cold-shock protein whose absence triggers the cold-shock response. Mol Microbiol 21: 12071218.
  • Jones, P.G., Mitta, M., Kim, Y., Jiang, W. & Inouye, M. (1996) Cold shock induces a major ribosomal-associated protein that unwinds double-stranded RNA in Escherichia coli. Proc Natl Acad Sci USA 93: 7680.DOI: 10.1073/pnas.93.1.76
  • Laalami, S., Sacerdot, C., Vachon, G., Mortensen, K., Sperling-Petersen, H.U., Cenatiempo, Y. & Grunberg-Manago, M. (1991) Structural and functional domains of E. coli initiation factor IF2. Biochimie 73: 15571566.
  • Luttinger, A., Hahn, J. & Dubnau, D. (1996) Polynucleotide phosphorylase is necessary for competence development in Bacillus subtilis. Mol Microbiol 19: 343356.
  • Matsunaga, J., Dyer, M., Simons, E.L. & Simons, R.W. (1996) Expression and regulation of the rnc and pdxJ operons of Escherichia coli. Mol Microbiol 22: 977989.
  • Miller, J.H. (1992) A Short Course in Bacterial Genetics: a Laboratory Manual and Handbook for Escherichia coli and Related Bacteria. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
  • Mitta, M., Fang, L. & Inouye, M. (1997) Deletion analysis of cspA of Escherichia coli: requirement of the AT-rich UP element for cspA transcription and the downstream box in the coding region for its cold shock induction. Mol Microbiol 26: 321335.
  • Neuhaus, K., Rapposch, S., Francis, K.P. & Scherer, S. (2000) Restart of exponential growth of cold-shocked Yersinia enterocolitica occurs after down-regulation of cspA1/A2 mRNA. J Bacteriol 182: 32853288.
  • Nicholson, A.W. (1997) Escherichia coli ribonucleases: paradigms for understanding cellular RNA metabolism and regulation. In Ribonucleases: Structures and Functions. D’Alessio, G., and Riordan, J.F. (eds). NY: Academic Press, pp. 149.
  • Panoff, J.M., Thammavongs, B., Gueguen, M. & Boutibonnes, P. (1998) Cold stress responses in mesophilic bacteria. Cryobiology 36: 7583.DOI: 10.1006/cryo.1997.2069
  • Pepe, C.M., Maslesa-Galic, S. & Simons, R.W. (1994) Decay of the IS10 antisense RNA by 3′ exonucleases: evidence that RNase II stabilizes RNA-OUT against PNPase attack. Mol Microbiol 13: 11331142.
  • Pepe, C.M., Suzuki, C., Laurie, C. & Simons, R.W. (1997) Regulation of the ‘tetCD’ genes of transposon Tn10. J Mol Biol 270: 1425.DOI: 10.1006/jmbi.1997.1094
  • Plumbridge, J.A. & Springer, M. (1983) Organization of the Escherichia coli chromosome around the genes for translation initiation factor IF2 (infB) and a transcription termination factor (nusA). J Mol Biol 167: 227243.
  • Portier, C., Dondon, L., Grunberg-Manago, M. & Regnier, P. (1987) The first step in the functional inactivation of the Escherichia coli polynucleotide phosphorylase messenger is a ribonuclease III processing at the 5′ end. EMBO J 6: 21652170.
  • Py, B., Causton, H., Mudd, E.A. & Higgins, C.F. (1994) A protein complex mediating mRNA degradation in Escherichia coli. Mol Microbiol 14: 717729.
  • Py, B., Higgins, C.F., Krisch, H.M. & Carpousis, A.J. (1996) A Dead-box RNA helicase in the Escherichia coli RNA degradosome. Nature 381: 169172.
  • Regnier, P. & Grunberg-Manago, M. (1989) Cleavage by RNase III in the transcripts of the metY–nusA–infB operon of Escherichia coli releases the tRNA and initiates the decay of the downstream mRNA. J Mol Biol 210: 293302.
  • Regnier, P. & Grunberg-Manago, M. (1990) RNase III cleavages in non-coding leaders of Escherichia coli transcripts control mRNA stability and genetic expression. Biochimie 72: 825834.
  • Regnier, P. & Portier, C. (1986) Initiation, attenuation and RNase III processing of transcripts from the Escherichia coli operon encoding ribosomal protein S15 and polynucleotide phosphorylase. J Mol Biol 187: 2332.
  • Robert-Le Meur, M. & Portier, C. (1992) E. coli polynucleotide phosphorylase expression is autoregulated through an RNase III-dependent mechanism. EMBO J 11: 26332641.
  • Robert-Le Meur, M. & Portier, C. (1994) Polynucleotide phosphorylase of Escherichia coli induces the degradation of its RNase III processed messenger by preventing its translation. Nucleic Acids Res 22: 397403.
  • Simons, R.W., Houman, F. & Kleckner, N. (1987) Improved single and multicopy lac-based cloning vectors for protein and operon fusions. Gene 53: 8596.
  • Takiff, H.E., Chen, S. & Court, D.L. (1989) Genetic analysis of the rnc operon of Escherichia coli. J Bacteriol 171: 25812590.
  • Toone, W.M., Rudd, K.E. & Friesen, J.D. (1991) deaD, a new Escherichia coli gene encoding a presumed ATP-dependent RNA helicase, can suppress a mutation in rpsB, the gene encoding ribosomal protein S2. J Bacteriol 173: 32913302.
  • Zangrossi, S., Briani, F., Ghisotti, D., Regonesi, M.E., Tortora, P. & Deho, G. (2000) Transcriptional and post-transcriptional control of polynucleotide phosphorylase during cold acclimation in Escherichia coli. Mol Microbiol36: 1470–1480.