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  • Van Aalten, D.M., DiRusso, C.C., Knudsen, J., and Wierenga, R.K. (2000) Crystal structure of FadR, a fatty acid-responsive transcription factor with a novel acyl coenzyme A-binding fold. EMBO J 19: 51675177.
  • Black, P.N., DiRusso, C.C., Metzger, A.K., and Heimert, T.L. (1992) Cloning, sequencing, and expression of the fadD gene of Escherichia coli encoding acyl coenzyme A synthetase. J Biol Chem 267: 2551325520.
  • Blattner, F.R., Plunkett, G., III, Bloch, C.A., Perna, N.T., Burland, V., Riley, M., et al. (1997) The complete genome sequence of Escherichia coli K-12. Science 277: 14531474.
  • Buchet, A., Eichler, K., and Mandrand-Berthelot, M.A. (1998) Regulation of the carnitine pathway in Escherichia coli: investigation of the cai-fix divergent promoter region. J Bacteriol 180: 25992608.
  • Campbell, J.W., and Cronan, J.E., Jr (2001) Escherichia coli FadR positively regulates transcription of the fabB fatty acid biosynthetic gene. J Bacteriol 183: 59825990.
  • Campbell, J.W., and Cronan, J.E., Jr (2002) The enigmatic Escherichia coli fadE gene is yafH. J Bacteriol 184: 37593764.
  • Clark, D.P. (1989) The fermentation pathways of Escherichia coli. FEMS Microbiol Lett 63: 223234.
  • Clark, D.P., and Cronan, J.E., Jr (1996) Two-carbon compounds and fatty acids as carbon sources. In: Escherichia coli and Salmonella typhimurium: Cellular and Molecular Biology. Neidhardt, F.C., Curtiss, R., Ingraham, J.L., Lin, E.C.C., Low, K.B., Magasanik, B., et al. (eds) . Washington, DC: American Society for Microbiology Press, pp. 343357.
  • Datsenko, K.A., and Wanner, B.L. (2000) One-step of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci USA 97: 66406645.
  • DiRusso, C.C., Connell, E.J., Faergeman, N.J., Knudsen, J., Hansen, J.K., and Black, P.N. (2000) Murine FATP alleviates growth and biochemical deficiencies of yeast fat1Δ strains. Eur J Biochem 267: 44224433.
  • Faergeman, N.J., DiRusso, C.C., Elberger, A., Knudsen, J., and Black, P.N. (1997) Disruption of the Saccharomyces cerevisiae homologue to the murine fatty acid transport protein impairs uptake and growth on long-chain fatty acids. J Biol Chem 272: 85318538.
  • Gui, L., Sunnarborg, A., and LaPorte, D.C. (1996) Regulated expression of a repressor protein: FadR activates iclR. J Bacteriol 178: 47044709.
  • Haller, T., Buckel, T., Retey, J., and Gerlt, J.A. (2000) Discovering new enzymes and metabolic pathways: conversion of succinate to propionate by Escherichia coli. Biochemistry 39: 46224629.
  • Han, X., and Gross, C.A. (1994) Electrospray ionization mass spectroscopic analysis of human erythrocyte plasma membrane phospholipids. Proc Natl Acad Sci USA 91: 1063510639.
  • Henry, M.F., and Cronan, J.E., Jr (1991) Escherichia coli transcription factor that both activates fatty acid synthesis and represses fatty acid degradation. J Mol Biol 222: 843849.
  • Henry, M.F., and Cronan, J.E., Jr (1992) A new mechanism of transcriptional regulation: release of an activator triggered by small molecule binding. Cell 70: 671679.
  • Hirsch, D.A., , S., and Lodish, H.F. (1998) A family of fatty acid transporters conserved from mycobacterium to man. Proc Natl Acad Sci USA 95: 86258629.
  • Hughes, K.T., Simons, R.W., and Nunn, W.D. (1988) Regulation of fatty acid degradation in Escherichia coli: fadR superrepressor mutants are unable to utilize fatty acids. J Bacteriol 170: 16661671.
  • Iuchi, S., and Lin, E.C.C. (1988) arcA (dye), a global regulatory gene in Escherichia coli mediating repression of enzymes in aerobic pathways. Proc Natl Acad Sci USA 85: 18881892.
  • Kameda, K., and Nunn, W.D. (1981) Purification and characterization of acyl coenzyme A synthetase from Escherichia coli. J Biol Chem 256: 57025707.
  • Klein, K., Steinberg, R., Fiethen, B., and Overath, P. (1971) Fatty acid degradation in Escherichia coli. An inducible system for the uptake of fatty acids and further characterization of old mutants. Eur J Biochem 19: 442450.
  • Lucas, R.L., and Lee, C.A. (2001) Roles of hilC and hilD in regulation of hilA expression in Salmonella enterica serovar Typhimurium. J Bacteriol 183: 27332745.
  • Mackie, R.I., White, B.A., and Bryant, M.P. (1991) Lipid metabolism in anaerobic ecosystems. Crit Rev Microbiol 17: 449479.
  • Maloy, S.R., and Nunn, W.D. (1981) Role of gene fadR in Escherichia coli acetate metabolism. J Bacteriol 148: 8390.
  • Maloy, S.R., Bohlander, M., and Nunn, W.D. (1980) Elevated levels of glyoxylate shunt enzymes in Escherichia coli strains constitutive for fatty acid degradation. J Bacteriol 143: 720725.
  • Metcalf, W.W., Zhang, J.K., Shi, X., and Wolfe, R.S. (1997) Molecular, genetic, and biochemical characterization of the serC gene of Methanosarcina barkeri Fusaro. J Bacteriol 178: 57975802.
  • Miller, J.H. (1992) A Short Course in Bacterial Genetics. Cold Spring Harbor, NY: Cold Spring Harbour Laboratory Press.
  • Nicols, B.P., Shafiq, O., and Meiners, V. (1998) Sequence analysis of Tn10 insertion sties in a collection of Escherichia coli strains used for genetic mapping and strain construction. J Bacteriol 180: 64086411.
  • Olivera, E.R., Carnicero, D., Garcia, B., Minambres, B., Moreno, M.A., Canedo, L., et al. (2001) Two different pathways are involved in the beta-oxidation of n-alkanoic and n-phenylalkanoic acids in Pseudomonas putida U: genetic studies and biotechnological applications. Mol Microbiol 39: 863874.
  • Overath, P., and Raufuss, E.M. (1967) The induction of the enzymes of fatty acid degradation in Escherichia coli. Biochem Biophys Res Commun 29: 2833.
  • Overath, P., Pauli, G., and Schairer, H.U. (1969) Fatty acid degradation in Escherichia coli. An inducible acyl-CoA synthetase, the mapping of old-mutations, and the isolation of regulatory mutants. Eur J Biochem 7: 559574.
  • Pauli, G., and Overath, P. (1974) Fatty acid degradation in Escherichia coli: requirement of cyclic adenosine monophosphate and cyclic adenosine monophosphate receptor protein for enzyme synthesis. J Bacteriol 117: 11781183.
  • Pramanik, A., Pawar, S., Antonian, E., and Schulz, H. (1979) Five different enzymatic activities are associated with the multienzyme complex of fatty acid oxidation in Escherichia coli. J Bacteriol 137: 469473.
  • Richmond, C.S., Glasner, J.D., Mau, R., Jin, H., and Blattner, F.R. (1999) Genome-wide expression profiling in Escherichia coli K-12. Nucleic Acids Res 27: 38213835.
  • Robinson, K., McGuire, A.M., and Church, G.M. (1998) A comprehensive library of DNA-binding site matrices for 55 proteins applied to the complete Escherichia coli K-12 genome. J Mol Biol 284: 241254.
  • Silbert, D.F., Ruch, F., and Vagelos, P.R. (1968) Fatty acid replacements in a fatty acid auxotroph of Escherichia coli. J Bacteriol 95: 16581665.
  • Singer, M., Baker, T.A., Schnitzler, G., Deischel, S.M., Goel, M., Dove, W., et al. (1989) A collection of strains containing genetically linked alternating antibiotic resistance elements for genetic mapping of Escherichia coli. Microbiol Rev 53: 124.
  • Snell, K.D., Feng, F., Zhong, L., Martin, D., and Madison, L.L. (2002) YfcX enables medium-chain-length poly(3-hydroxyalkanoate) formation from fatty acids in recombinant Escherichia coli fadB strains. J Bacteriol 184: 56965705.
  • Spector, M.P., DiRusso, C.C., Pallen, M.J., Garcia del Portillo, F., Dougan, G., and Finlay, B.B. (1999) The medium/long-chain fatty acyl-CoA dehydrogenase (fadF) gene of Salmonella typhimurium is a phase 1 starvation-stress response (SSR) locus. Microbiology 145: 1531.
  • Spratt, S.K., Black, P.N., Ragozzino, M.M., and Nunn, W.D. (1984) Cloning, mapping, and expression of genes involved in the fatty acid-degradative multienzyme complex of Escherichia coli. J Bacteriol 158: 535542.
  • Subrahmanyam, S., and Cronan, J.E., Jr (1998) Overproduction of a functional fatty acid biosynthetic enzyme blocks fatty acid synthesis in Escherichia coli. J Bacteriol 180: 45964602.
  • Walt, A., and Kahn, M.L. (2002) The fixA and fixB genes are necessary for anaerobic carnitine reduction in Escherichia coli. J Bacteriol 184: 40444047.
  • Xu, Y., Heath, R.J., Li, Z., Rock, C.O., and White, S.W. (2001) The FadR: DNA complex. Transcriptional control of fatty acid metabolism in Escherichia coli. J Biol Chem 276: 1737317379.
  • Yu, D., Ellis, H.M., Lee, E.-C., Jenkins, N.A., Copeland, N.G., and Court, D.L. (2000) An efficient recombination system for chromosome engineering in Escherichia coli. Proc Natl Acad Sci USA 97: 59785983.
  • Zhang, Y.M., Marrakchi, H., and Rock, C.O. (2002) The FabR (YijC) transcription factor regulates unsaturated fatty acid biosynthesis in Escherichia coli. J Biol Chem 277: 1555815565.