16S rRNA survey revealed complex bacterial communities and evidence of bacterial interference on human adenoids
Version of Record online: 31 OCT 2012
© 2012 Society for Applied Microbiology and Blackwell Publishing Ltd
Special Issue: Environmental Ecology of Pathogens and Resistances
Volume 15, Issue 2, pages 535–547, February 2013
How to Cite
Ren, T., Glatt, D. U., Nguyen, T. N., Allen, E. K., Early, S. V., Sale, M., Winther, B. and Wu, M. (2013), 16S rRNA survey revealed complex bacterial communities and evidence of bacterial interference on human adenoids. Environmental Microbiology, 15: 535–547. doi: 10.1111/1462-2920.12000
- Issue online: 28 JAN 2013
- Version of Record online: 31 OCT 2012
- Accepted manuscript online: 28 SEP 2012 04:15AM EST
- Manuscript Accepted: 22 SEP 2012
- Manuscript Revised: 11 SEP 2012
- Manuscript Received: 15 JUL 2012
- National Institutes of Health. Grant Number: DC003166-S1
Fig. S1. Number of OTUs as a function of sequence identity cut-off. A flare-up at 99% cut-off indicates that most of the bacterial diversity exists below the 97% identity cut-off that is used to approximate species.
Fig. S2. Adenoid microbiota is distinct from the microbiota of other human body sites. upgma clustering was performed based on the weighted UniFrac distance matrix.
Fig. S3. Bacterial species richness of adenoid and other human body sites. The average number of OTUs for each body site was estimated by Chao1. Error bars represent ± one standard deviation.
Table S1. Pairs of OTUs that show significant non-linear relationships by the MINE analysis. The table was sorted by the non-linear score from the highest to the lowest.
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