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emi12028-sup-0001-si.pptx71K

Fig. S1. Homology tree of aadA genes with subgroups used as common targets for real-time PCR. Subgroups were generated with sequences with > 85% similarities. The tree was generated using UPGMA [Pairwise (OG: 100%, UG: 0%) Gapcost: 0%] using Bionumerics 5.10 (Applied Maths, Sint-Martens-Latem, Belgium). The number designations of the different aadA genes correspond to their respective entries in GenBank. The letter designations of the different aadA genes were proposed by the present study.

emi12028-sup-0002-si.docx14K

Table S1. Streptomycin resistance and integrase genes used to design primers and probes for the TaqMan real-time PCR.

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