Rhizobium leguminosarum is the symbiont of lentils in the Middle East and Europe but not in Bangladesh
Article first published online: 19 SEP 2013
© 2013 Federation of European Microbiological Societies. Published by John Wiley & Sons Ltd. All rights reserved
FEMS Microbiology Ecology
Volume 87, Issue 1, pages 64–77, January 2014
How to Cite
Rashid, M. H.-o., Gonzalez, J., Young, J. P. W. and Wink, M. (2014), Rhizobium leguminosarum is the symbiont of lentils in the Middle East and Europe but not in Bangladesh. FEMS Microbiology Ecology, 87: 64–77. doi: 10.1111/1574-6941.12190
- Issue published online: 2 JAN 2014
- Article first published online: 19 SEP 2013
- Accepted manuscript online: 13 AUG 2013 02:13AM EST
- Manuscript Accepted: 7 AUG 2013
- Manuscript Revised: 5 AUG 2013
- Manuscript Received: 15 MAR 2013
- DAAD-Stipendien-und Betreuungsprogramm (STIBET)
Fig. S1. ML tree from partial 16S rRNA sequences.
Fig. S2. ML tree from partial recA gene sequences.
Fig. S3. ML tree from partial atpD gene sequences.
Fig. S4. ML tree from partial gln II gene sequences.
Fig. S5. Split graph from neighbor-network analysis based on concatenated sequence of recA-atpD-glnII genes of Lentil symbionts plus previously described strains of R. leguminosarum. R. etli and other related species.
Fig. S6. Majority rule consensus tree (50%) inferred from concatenated partial sequence of recA-atpD-glnII genes using CLONALFRAME without allowing recombination.
Fig. S7. Un-rooted ML tree from partial nodD gene sequences.
Table S1. Isolate numbers, soil pH and rhizobial density for different sample collection localities.
Table S2. Isolates under different lineages and sub-lineages in different analyses.
Table S3. List of primers and PCR conditions.
Table S4. GenBank accession numbers.
Table S5. Genetic distances among different sub-lineages (SL).
Table S6. Hierarchical amova of the genetic structure and gene flow of sub-lineages.
Table S7. Time to the most recent common ancestor (TMRCA) of all samples using CLONALFRAME.
Table S8. Phylogenetic incongruence using Shimodaira-Hasegawa (S-H) test.
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