• Chiba N, Murayama SY, Morozumi M, Nakayama E, Okada T, Iwata S, Sunakawa K & Ubukata K (2009) Rapid detection of eight causative pathogens for the diagnosis of bacterial meningitis by real-time PCR. J Infect Chemother 15: 9298.
  • Corpet F (1988) Multiple sequence alignment with hierarchical clustering. Nucleic Acids Res 16: 1088110890.
  • Gray MW, Sankoff D & Cedergren RJ (1984) On the evolutionary descent of organisms and organelles: a global phylogeny based on a highly conserved structural core in small subunit ribosomal RNA. Nucleic Acids Res 12: 58375852.
  • Hanaki K, Sekiguchi J, Shimada K, Sato A, Watari H, Kojima T, Miyoshi-Akiyama T & Kirikae T (2011) Loop-mediated isothermal amplification assays for identification of antiseptic- and methicillin-resistant Staphylococcus aureus. J Microbiol Methods 84: 251254.
  • Kennedy WA, Chang SJ, Purdy K et al. (2007) Incidence of bacterial meningitis in Asia using enhanced CSF testing: polymerase chain reaction, latex agglutination and culture. Epidemiol Infect 135: 12171226.
  • Kim DW, Kilgore PE, Kim EJ, Kim SA, Anh DD & Seki M (2011) Loop-mediated isothermal amplification assay for detection of Haemophilus influenzae type b in cerebrospinal fluid. J Clin Microbiol 49: 36213626.
  • Kubo T, Agoh M, Mai le Q et al. (2010) Development of a reverse transcription-loop-mediated isothermal amplification assay for detection of pandemic (H1N1) 2009 virus as a novel molecular method for diagnosis of pandemic influenza in resource-limited settings. J Clin Microbiol 48: 728735.
  • Lane DJ, Pace B, Olsen GJ, Stahl DA, Sogin ML & Pace NR (1985) Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses. P Natl Acad Sci USA 82: 69556959.
  • Lu JJ, Perng CL, Lee SY & Wan CC (2000) Use of PCR with universal primers and restriction endonuclease digestions for detection and identification of common bacterial pathogens in cerebrospinal fluid. J Clin Microbiol 38: 20762080.
  • Mai NT, Hoa NT, Nga TV et al. (2008) Streptococcus suis meningitis in adults in Vietnam. Clin Infect Dis 46: 659667.
  • McKenna JP, Fairley DJ, Shields MD, Cosby SL, Wyatt DE, McCaughey C & Coyle PV (2011) Development and clinical validation of a loop-mediated isothermal amplification method for the rapid detection of Neisseria meningitidis. Diagn Microbiol Infect Dis 69: 137144.
  • Nadkarni MA, Martin FE, Jacques NA & Hunter N (2002) Determination of bacterial load by real-time PCR using a broad-range (universal) probe and primers set. Microbiology 148: 257266.
  • Notomi T, Okayama H, Masubuchi H, Yonekawa T, Watanabe K, Amino N & Hase T (2000) Loop-mediated isothermal amplification of DNA. Nucleic Acids Res 28: E63.
  • Pandit L, Kumar S, Karunasagar I & Karunasagar I (2005) Diagnosis of partially treated culture-negative bacterial meningitis using 16S rRNA universal primers and restriction endonuclease digestion. J Med Microbiol 54: 539542.
  • Saez-Llorens X & McCracken GH Jr (2003) Bacterial meningitis in children. Lancet 361: 21392148.
  • Seki M, Yamashita Y, Torigoe H, Tsuda H, Sato S & Maeno M (2005) Loop-mediated isothermal amplification method targeting the lytA gene for detection of Streptococcus pneumoniae. J Clin Microbiol 43: 15811586.
  • Tomita N, Mori Y, Kanda H & Notomi T (2008) Loop-mediated isothermal amplification (LAMP) of gene sequences and simple visual detection of products. Nat Protoc 3: 877882.
  • Yamazaki W, Taguchi M, Ishibashi M, Kitazato M, Nukina M, Misawa N & Inoue K (2008) Development and evaluation of a loop-mediated isothermal amplification assay for rapid and simple detection of Campylobacter jejuni and Campylobacter coli. J Med Microbiol 57: 444451.
  • Zimmerli W (2005) How to differentiate bacterial from viral meningitis. Intensive Care Med 31: 16081610.