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References

  • Allers T, Ngo HP, Mevarech M & Lloyd RG (2004) Development of additional selectable markers for the halophilic archaeon Haloferax volcanii based on the leuB and trpA genes. Appl Environ Microbiol 70: 943953.
  • Anderson I, Tindall BJ, Pomrenke H et al. (2009) Complete genome sequence of Halorhabdus utahensis type strain (AX-2T). Stand Genomic Sci 1: 218225.
  • Antón J, Meseguer I & Rodríguezvalera F (1988) Production of an extracellular polysaccharide by Haloferax mediterranei. Appl Environ Microbiol 54: 23812386.
  • Baliga NS, Bonneau R, Facciotti MT et al. (2004) Genome sequence of Haloarcula marismortui: a halophilic archaeon from the Dead Sea. Genome Res 14: 22212234.
  • Bitan-Banin G, Ortenberg R & Mevarech M (2003) Development of a gene knockout system for the halophilic archaeon Haloferax volcanii by use of the pyrE gene. J Bacteriol 185: 772778.
  • Bolhuis H, Palm P, Wende A, Falb M, Rampp M, Rodriguez-Valera F, Pfeiffer F & Oesterhelt D (2006) The genome of the square archaeon Haloquadratum walsbyi: life at the limits of water activity. BMC Genomics 7: 169180.
  • Breuert S, Allers T, Spohn G & Soppa J (2006) Regulated polyploidy in halophilic archaea. PLoS ONE 1: e92.
  • Cai S, Cai L, Liu H, Liu X, Han J, Zhou J & Xiang H (2012) Identification of the haloarchaeal phasin (PhaP) that functions in polyhydroxyalkanoate accumulation and granule formation in Haloferax mediterranei. Appl Environ Microbiol 78: 19461952.
  • Capes MD, Coker JA, Gessler R, Grinblat-Huse V, DasSarma SL, Jacob CG, Kim J-M, DasSarrna P & DasSarma S (2011) The information transfer system of halophilic archaea. Plasmid 65: 77101.
  • Cheung J, Danna KJ, O'Connor EM, Price LB & Shand RF (1997) Isolation, sequence, and expression of the gene encoding halocin H4, a bacteriocin from the halophilic archaeon Haloferax mediterranei R4. J Bacteriol 179: 548551.
  • Cline SW, Lam WL, Charlebois RL, Schalkwyk LC & Doolittle WF (1989) Transformation methods for halophilic archaebacteria. Can J Microbiol 35: 148152.
  • DasSarma S, Capes M & DasSarma P (2009) Haloarchaeal megaplasmids. Microbial Megaplasmids, Vol. 11 (Schwartz E, ed), pp. 330. Springer-Verlag, Berlin Heidelberg.
  • Falb M, Pfeiffer F, Palm P, Rodewald K, Hickmann V, Tittor J & Oesterhelt D (2005) Living with two extremes: conclusions from the genome sequence of Natronomonas pharaonis. Genome Res 15: 13361343.
  • Feng B, Cai S, Han J, Liu H, Zhou J & Xiang H (2010) Identification of the phaB genes and analysis of the PHBV precursor supplying pathway in Haloferax mediterranei. Wei sheng wu xue bao 50: 13051312.
  • Grabowski B & Kelman Z (2003) Archaeal DNA replication: eukaryal proteins in a bacterial context. Annu Rev Microbiol 57: 487516.
  • Han J, Lu Q, Zhou L, Zhou J & Xiang H (2007) Molecular characterization of the phaECHm genes, required for biosynthesis of poly(3-hydroxybutyrate) in the extremely halophilic archaeon Haloarcula marismortui. Appl Environ Microbiol 73: 60586065.
  • Han J, Zhang F, Hou J et al. (2012) Complete genome sequence of the metabolically versatile halophilic archaeon Haloferax mediterranei, a Poly (3-Hydroxybutyrate-co-3-Hydroxyvalerate) producer. J Bacteriol 194: 44634464.
  • Hartman AL, Norais C, Badger JH et al. (2010) The complete genome sequence of Haloferax volcanii DS2, a model archaeon. PLoS ONE 5: e9605.
  • Jäger A, Samorski R, Pfeifer F & Klug G (2002) Individual gvp transcript segments in Haloferax mediterranei exhibit varying half-lives, which are differentially affected by salt concentration and growth phase. Nucleic Acids Res 30: 54365443.
  • Jiang X, Wang S, Cheng H, Huo Y, Zhang X, Zhu X, Han X, Ni P & Wu M (2011) Genome sequence of Halobiforma lacisalsi AJ5, an extremely halophilic archaeon which harbors a bop gene. J Bacteriol 193: 70237024.
  • Lillo JG & Rodriguez-Valera F (1990) Effects of culture conditions on poly(β-hydroxybutyric acid) production by Haloferax mediterranei. Appl Environ Microbiol 56: 25172521.
  • Liu H, Han J, Liu X, Zhou J & Xiang H (2011a) Development of pyrF-based gene knockout systems for genome-wide manipulation of the archaea Haloferax mediterranei and Haloarcula hispanica. J Genet Genomics 38: 261269.
  • Liu H, Wu Z, Li M, Zhang F, Zheng H, Han J, Liu J, Zhou J, Wang S & Xiang H (2011b) Complete genome sequence of Haloarcula hispanica, a model haloarchaeon for studying genetics, metabolism, and virus-host interaction. J Bacteriol 193: 60866087.
  • Lledó B, Martnez-Espinosa R, Marhuenda-Egea F & Bonete M (2004) Respiratory nitrate reductase from haloarchaeon Haloferax mediterranei: biochemical and genetic analysis. Biochim Biophys Acta 1674: 5059.
  • Lu Q, Han J, Zhou L, Zhou J & Xiang H (2008) Genetic and biochemical characterization of the poly(3-hydroxybutyrate-co-3-hydroxyvalerate) synthase in Haloferax mediterranei. J Bacteriol 190: 41734180.
  • Martinez-Espinosa RM, Marhuenda-Egea FC & Bonete MJ (2001) Assimilatory nitrate reductase from the haloarchaeon Haloferax mediterranei: purification and characterisation. FEMS Microbiol Lett 204: 381385.
  • Meseguer I & Rodriguez-Valera F (1985) Production and purification of halocin H4. FEMS Microbiol Lett 28: 177182.
  • Meseguer I & Rodriguez-Valera F (1986) Effect of halocin H4 on cells of Halobacterium halobium. Microbiology 132: 30613068.
  • Ng WL & Dassarma S (1993) Minimal replication origin of the 200-kilobase Halobacterium plasmid pNRC100. J Bacteriol 175: 45844596.
  • Ng WV, Ciufo SA, Smith TM et al. (1998) Snapshot of a large dynamic replicon in a halophilic archaeon: megaplasmid or minichromosome? Genome Res 8: 11311141.
  • Ng WV, Kennedy SP, Mahairas GG et al. (2000) Genome sequence of Halobacterium species NRC-1. P Natl Acad Sci USA 97: 1217612181.
  • Norais C, Hawkins M, Hartman AL, Eisen JA, Myllykallio H & Allers T (2007) Genetic and physical mapping of DNA replication origins in Haloferax volcanii. PLoS Genet 3: e77.
  • Peck RF, DasSarma S & Krebs MP (2000) Homologous gene knockout in the archaeon Halobacterium salinarum with ura3 as a counterselectable marker. Mol Microbiol 35: 667676.
  • Pfeiffer F, Schuster S, Broicher A, Falb M, Palm P, Rodewald K, Ruepp A, Soppa J, Tittor J & Oesterhelt D (2008) Evolution in the laboratory: the genome of Halobacterium salinarum strain R1 compared to that of strain NRC-1. Genomics 91: 335346.
  • Robinson NP, Dionne I, Lundgren M, Marsh VL, Bernander R & Bell SD (2004) Identification of two origins of replication in the single chromosome of the archaeon Sulfolobus solfataricus. Cell 116: 2538.
  • Roh SW, Nam YD, Nam SH, Choi SH, Park HS & Bae JW (2010) Complete genome sequence of Halalkalicoccus jeotgali B3T, an extremely halophilic archaeon. J Bacteriol 192: 45284529.
  • Sambrook J & Russell DW (2001) Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
  • Tindall BJ, Schneider S, Lapidus A et al. (2009) Complete genome sequence of Halomicrobium mukohataei type strain (arg-2T). Stand Genomic Sci 1: 270277.
  • Wu Z, Liu H, Liu J, Liu X & Xiang H (2012) Diversity and evolution of multiple orc/cdc6-adjacent replication origins in haloarchaea. BMC Genomics 13: 478.
  • Zhang R & Zhang CT (2005) Identification of replication origins in archaeal genomes based on the Z-curve method. Archaea 1: 335346.
  • Zhou L, Zhou M, Sun C, Xiang H & Tan H (2007) Genetic analysis of a novel plasmid pZMX101 from Halorubrum saccharovorum: determination of the minimal replicon and comparison with the related haloarchaeal plasmid pSCM201. FEMS Microbiol Lett 270: 104108.