SEARCH

SEARCH BY CITATION

References

  • Aranda-Olmedo I, Marin P, Ramos JL & Marques S (2006) Role of the ptsN gene product in catabolite repression of the Pseudomonas putida TOL toluene degradation pathway in chemostat cultures. Appl Environ Microbiol 72: 74187421.
  • Bagdasarian M, Lurz R, Ruckert B, Franklin FC, Bagdasarian MM, Frey J & Timmis KN (1981) Specific-purpose plasmid cloning vectors. II. Broad host range, high copy number, RSF1010-derived vectors, and a host-vector system for gene cloning in Pseudomonas. Gene 16: 237247.
  • Cases I, Perez-Martin J & de Lorenzo V (1999) The IIANtr (PtsN) protein of Pseudomonas putida mediates the C source inhibition of the sigma54-dependent Pu promoter of the TOL plasmid. J Biol Chem 274: 1556215568.
  • Choi KH, Gaynor JB, White KG, Lopez C, Bosio CM, Karkhoff-Schweizer RR & Schweizer HP (2005) A Tn7-based broad-range bacterial cloning and expression system. Nat Methods 2: 443448.
  • Choi KH, Kumar A & Schweizer HP (2006) A 10-min method for preparation of highly electrocompetent Pseudomonas aeruginosa cells: application for DNA fragment transfer between chromosomes and plasmid transformation. J Microbiol Methods 64: 391397.
  • Dennis JJ & Zylstra GJ (1998) Plasposons: modular self-cloning minitransposon derivatives for rapid genetic analysis of gram-negative bacterial genomes. Appl Environ Microbiol 64: 27102715.
  • Deutscher J, Francke C & Postma PW (2006) How phosphotransferase system-related protein phosphorylation regulates carbohydrate metabolism in bacteria. Microbiol Mol Biol Rev 70: 9391031.
  • Ishiwa A & Komano T (2004) PilV adhesins of plasmid R64 thin pili specifically bind to the lipopolysaccharides of recipient cells. J Mol Biol 343: 615625.
  • Kouzuma A, Endoh T, Omori T, Nojiri H, Yamane H & Habe H (2007) The ptsP gene encoding the PTS family protein EINtr is essential for dimethyl sulfone utilization by Pseudomonas putida. FEMS Microbiol Lett 275: 175181.
  • Lawley T & Wilkins BM (2004) Bacterial conjugation in gram-negative bacteria. Plasmid Biology (Funnel BE & Phillips GJ, eds), pp. 203226. ASM press, Washington, DC.
  • Manoil C & Rosenbusch JP (1982) Conjugation-deficient mutants of Escherichia coli distinguish classes of functions of the outer membrane OmpA protein. Mol Gen Genet 187: 148156.
  • Miyazaki R, Ohtsubo Y, Nagata Y & Tsuda M (2008) Characterization of the traD operon of naphthalene-catabolic plasmid NAH7: a host-range modifier in conjugative transfer. J Bacteriol 190: 62816289.
  • Nelson KE, Weinel C, Paulsen IT et al. (2002) Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440. Environ Microbiol 4: 799808.
  • Ono A, Miyazaki R, Sota M, Ohtsubo Y, Nagata Y & Tsuda M (2007) Isolation and characterization of naphthalene-catabolic genes and plasmids from oil-contaminated soil by using two cultivation-independent approaches. Appl Microbiol Biotechnol 74: 501510.
  • Pfluger K & de Lorenzo V (2007) Growth-dependent phosphorylation of the PtsN (EIINtr) protein of Pseudomonas putida. J Biol Chem 282: 1820618211.
  • Pfluger-Grau K & Gorke B (2010) Regulatory roles of the bacterial nitrogen-related phosphotransferase system. Trends Microbiol 18: 205214.
  • Postma PW, Lengeler JW & Jacobson GR (1993) Phosphoenolpyruvate: carbohydrate phosphotransferase systems of bacteria. Microbiol Rev 57: 543594.
  • Purdy D, O'Keeffe TA, Elmore M et al. (2002) Conjugative transfer of clostridial shuttle vectors from Escherichia coli to Clostridium difficile through circumvention of the restriction barrier. Mol Microbiol 46: 439452.
  • Sambrook J, Fritsch EF & Maniatis T (1989) Molecular Cloning: A Laboratory Manual, 3rd edn. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
  • Sota M, Yano H, Ono A et al. (2006) Genomic and functional analysis of the IncP-9 naphthalene-catabolic plasmid NAH7 and its transposon Tn4655 suggests catabolic gene spread by a tyrosine recombinase. J Bacteriol 188: 40574067.
  • Springael D & Top EM (2004) Horizontal gene transfer and microbial adaptation to xenobiotics: new types of mobile genetic elements and lessons from ecological studies. Trends Microbiol 12: 5358.
  • Tsuda M & Iino T (1988) Identification and characterization of Tn4653, a transposon covering the toluene transposon Tn4651 on TOL plasmid pWW0. Mol Gen Genet 213: 7277.
  • Tsuda M & Iino T (1990) Naphthalene degrading genes on plasmid NAH7 are on a defective transposon. Mol Gen Genet 223: 3339.
  • Velazquez F, Pfluger K, Cases I, De Eugenio LI & de Lorenzo V (2007) The phosphotransferase system formed by PtsP, PtsO, and PtsN proteins controls production of polyhydroxyalkanoates in Pseudomonas putida. J Bacteriol 189: 45294533.
  • Wiedenheft B, Sternberg SH & Doudna JA (2012) RNA-guided genetic silencing systems in bacteria and archaea. Nature 482: 331338.
  • Yanisch-Perron C, Vieira J & Messing J (1985) Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene 33: 103119.
  • Yen KM & Gunsalus IC (1982) Plasmid gene organization: naphthalene/salicylate oxidation. P Natl Acad Sci USA 79: 874878.