Expression of Porphyromonas gingivalis small RNA in response to hemin availability identified using microarray and RNA-seq analysis
Article first published online: 19 NOV 2013
© 2013 Federation of European Microbiological Societies. Published by John Wiley & Sons Ltd. All rights reserved
FEMS Microbiology Letters
Special Issue: Systems and Synthetic Biology
Volume 351, Issue 2, pages 202–208, February 2014
How to Cite
Phillips, P., Progulske-Fox, A., Grieshaber, S. and Grieshaber, N. (2014), Expression of Porphyromonas gingivalis small RNA in response to hemin availability identified using microarray and RNA-seq analysis. FEMS Microbiology Letters, 351: 202–208. doi: 10.1111/1574-6968.12320
- Issue published online: 24 FEB 2014
- Article first published online: 19 NOV 2013
- Accepted manuscript online: 30 OCT 2013 04:37AM EST
- Manuscript Accepted: 27 OCT 2013
- Manuscript Revised: 18 OCT 2013
- Manuscript Received: 3 SEP 2013
- NIH. Grant Number: #R21 DE01986
Table S1. Oligonucelotides used to prepare cDNA for microarray analysis (NimbleGen).
Table S2. Oligonucelotides used to prepare cDNA libraries for RNA-seq analysis.
Table S3. Barcode and sample description key for maq mapped Porphyromonas gingivalis small RNA transcripts identified by RNA-seq analysis (Illumina).
Table S4. Probes for Northern analysis.
Table S5. NimbleGen microarray analysis identified 37 Porphyromonas gingivalis sRNA whose terminators could be predicted.
Table S6. Twenty-two putative Porphyromonas gingivalis sRNAs located within intergenic sites that were up-regulated in response to hemin.
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