SEARCH

SEARCH BY CITATION

References

  • Ameyama M, Matsushita K, Shinagawa E, Hayashi M & Adachi O (1988) Pyrroloquinoline quinone: excretion by methylotrophs and growth stimulation for microorganisms. BioFactors 1: 5153.
  • Ausubel FM (1988) Current Protocols in Molecular Biology. Greene Pub Associates, New York.
  • Chelius MK & Triplett EW (2001) The diversity of Archaea and Bacteria in association with the roots of Zea mays L. Microb Ecol 41: 252263.
  • Choi O, Kim J, Kim JG, Jeong Y, Moon JS, Park CS & Hwang I (2008) Pyrroloquinoline quinone is a plant growth promotion factor produced by Pseudomonas fluorescens B16. Plant Physiol 146: 657668.
  • DeWerra P, Pechy-Tarr M, Keel C & Maurhofer M (2009) Role of gluconic acid production in the regulation of biocontrol traits of Pseudomonas fluorescens CHA0. Appl Environ Microbiol 75: 41624174.
  • Dharni S, Alam M, Kalani K, Abdul K, Samad A, Srivastava SK & Patra DD (2012) Production, purification, and characterization of antifungal metabolite from Pseudomonas aeruginosa SD12, a new strain obtained from tannery waste polluted soil. J Microbiol Biotechnol 22: 674683.
  • Fenton AM, Stephens PM, Crowley J, O'Callaghan M & O'Gara F (1992) Exploitation of gene(s) involved in 2,4-diacetylphloroglucinol biosynthesis to confer a new biocontrol capability to a Pseudomonas strain. Appl Environ Microbiol 58: 38733878.
  • Gross DC & DeVay JE (1977) Production and purification of syringomycin, a phytotoxin produced by Pseudomonas syringae. Physiol Plant Pathol 11: 1328.
  • Gu G, Smith L, Liu A & Lu SE (2011) Genetic and biochemical map for the biosynthesis of occidiofungin, an antifungal produced by Burkholderia contaminans strain MS14. Appl Environ Microbiol 77: 61896198.
  • Guo YB, Li J, Li L, Chen F, Wu W, Wang J & Wang H (2009) Mutations that disrupt either the pqq or the gdh gene of Rahnella aquatilis abolish the production of an antibacterial substance and result in reduced biological control of grapevine crown gall. Appl Environ Microbiol 75: 67926803.
  • Hunter PA, Dawson S, French GL et al. (2010) Antimicrobial-resistant pathogens in animals and man: prescribing, practices and policies. J Antimicrob Chemother 65(suppl 1): i3i17.
  • Jalan N, Aritua V, Kumar D, Yu F, Jones JB, Graham JH, Setubal JC & Wang N (2011) Comparative genomic analysis of Xanthomonas axonopodis pv. citrumelo F1, which causes citrus bacterial spot disease, and related strains provides insights into virulence and host specificity. J Bacteriol 193: 63426357.
  • Lago JH, Ito AT, Fernandes CM, Young MC & Kato MJ (2012) Secondary metabolites isolated from Piper chimonantifolium and their antifungal activity. Nat Prod Res 26: 770773.
  • Lutgen EM, McEvoy JM, Sherwood JS & Logue CM (2009) Antimicrobial resistance profiling and molecular subtyping of Campylobacter spp. from processed turkey. BMC Microbiol 9: 203.
  • Manuel J, Selin C, Fernando WG & De Kievit T (2012) Stringent response mutants of Pseudomonas chlororaphis PA23 exhibit enhanced antifungal activity against Sclerotinia sclerotiorum in vitro. Microbiology 158: 207216.
  • Meyer JB, Frapolli M, Keel C & Maurhofer M (2011) Pyrroloquinoline quinone biosynthesis gene pqqC, a novel molecular marker for studying the phylogeny and diversity of phosphate-solubilizing pseudomonads. Appl Environ Microbiol 77: 73457354.
  • Michielse CB & Rep M (2009) Pathogen profile update: Fusarium oxysporum. Mol Plant Pathol 10: 311324.
  • Ortet P, Barakat M, Lalaouna D, Fochesato S, Barbe V, Vacherie B, Santaella C, Heulin T & Achouak W (2011) Complete genome sequence of a beneficial plant root-associated bacterium, Pseudomonas brassicacearum. J Bacteriol 193: 3146.
  • Palleroni NJ (2003) Prokaryote taxonomy of the 20th century and the impact of studies on the genus Pseudomonas: a personal view. Microbiology 149: 17.
  • Park JY, Oh SA, Anderson AJ, Neiswender J, Kim JC & Kim YC (2011) Production of the antifungal compounds phenazine and pyrrolnitrin from Pseudomonas chlororaphis O6 is differentially regulated by glucose. Lett Appl Microbiol 52: 532537.
  • Peix A, Ramirez-Bahena MH & Velazquez E (2009) Historical evolution and current status of the taxonomy of genus Pseudomonas. Infect Genet Evol 9: 11321147.
  • Policegoudra RS, Divakar S & Aradhya SM (2007) Identification of difurocumenonol, a new antimicrobial compound from mango ginger (Curcuma amada Roxb.) rhizome. J Appl Microbiol 102: 15941602.
  • Puehringer S, Metlitzky M & Schwarzenbacher R (2008) The pyrroloquinoline quinone biosynthesis pathway revisited: a structural approach. BMC Biochem 9: 8.
  • Ramette A, Frapolli M, Fischer-Le SM, Gruffaz C, Meyer JM, Defago G, Sutra L & Moenne-Loccoz Y (2011) Pseudomonas protegens sp. nov., widespread plant-protecting bacteria producing the biocontrol compounds 2,4-diacetylphloroglucinol and pyoluteorin. Syst Appl Microbiol 34: 180188.
  • Rella A, Yang MW, Gruber J, Montagna MT, Luberto C, Zhang YM & Del Poeta M (2012) Pseudomonas aeruginosa inhibits the growth of Cryptococcus species. Mycopathologia 173: 451461.
  • Schnider U, Keel C, Voisard C, Defago G & Haas D (1995) Tn5-directed cloning of pqq genes from Pseudomonas fluorescens CHA0: mutational inactivation of the genes results in overproduction of the antibiotic pyoluteorin. Appl Environ Microbiol 61: 38563864.
  • Sikorski J, Jahr H & Wackernagel W (2001) The structure of a local population of phytopathogenic Pseudomonas brassicacearum from agricultural soil indicates development under purifying selection pressure. Environ Microbiol 3: 176186.
  • Solovyev V & Salamov A (2011) Automatic annotation of microbial genomes and metagenomic sequences. Metagenomics and its Applications in Agriculture, Biomedicine and Environmental Studies (Li RW, ed.), pp. 6178. Nova Science Publishers, Hauppauge, NY.
  • Tamura K, Peterson D, Peterson N, Stecher G, Nei M & Kumar S (2011) mega5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28: 27312739.
  • West SE, Schweizer HP, Dall C, Sample AK & Runyenjanecky LJ (1994) Construction of improved Escherichia-Pseudomonas shuttle vectors derived from pUC18/19 and sequence of the region required for their replication in Pseudomonas aeruginosa. Gene 148: 8186.
  • Yamamoto S, Kasai H, Arnold DL, Jackson RW, Vivian A & Harayama S (2000) Phylogeny of the genus Pseudomonas: intrageneric structure reconstructed from the nucleotide sequences of gyrB and rpoD genes. Microbiology 146: 23852394.
  • Yang MM, Mavrodi DV, Mavrodi OV, Bonsall RF, Parejko JA, Paulitz TC, Thomashow LS, Yang HT, Weller DM & Guo JH (2011) Biological control of take-all by fluorescent Pseudomonas spp. from Chinese wheat fields. Phytopathology 101: 14811491.
  • Zerbino DR & Birney E (2008) velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res 18: 821829.