SEARCH

SEARCH BY CITATION

References

  • Bommarius, A.S., and Riebel-Bommarius, R.R. (2004) Biocatalysis: Fundamentals and Applications. Weinheim, Germany: Wiley-VCH.
  • Bull, A.T., and Stach, J.E. (2007) Marine actinobacteria: new opportunities for natural product search and discovery. Trends Microbiol 15: 491499.
  • Bull, A.T., Ward, A.C., and Goodfellow, M. (2000) Search and discovery strategies for biotechnology: the paradigm shift. Microbiol Mol Biol Rev 64: 573606.
  • Chen, Q.-X., Zhang, W., Zheng, W.-Z., Zhao, H., Wang, H.R., and Zhan, J. (1996) Kinetics of inhibition of alkaline phosphatase from green crab (Seylla serrata) by N-bromosuccinamide. J Protein Chem 15: 345350.
  • Clarke, K.R., and Warwick, R.M. (2001) Change in Marine Communities: An Approach to Statistical Analysis and Interpretation, 2nd edn. Plymouth, UK: PRIMER-E.
  • Clarke, K.R., Somerfield, P.J., and Gorley, R.N. (2008) Testing of null hypotheses in exploratory community analyses: similarity profiles and biota-environment linkage. J Exp Mar Biol Ecol 366: 5669.
  • Cripps, R.E., Trudgill, P.W., and Whateley, J.G. (1978) The metabolism of 1-phenylethanol and acetophenone by Nocardia T5 and an Arthrobacter species. Eur J Biochem 86: 175186.
  • DeLong, E.F., Preston, C.M., Mincer, T., Rich, V., Hallam, S.J., Frigaard, N.U., et al. (2006) Community genomics among stratified microbial assemblages in the ocean's interior. Science 311: 496503.
  • Dinsdale, E.A., Edwards, R.A., Hall, D., Angly, F., Breitbart, M., Brulc, J.M., et al. (2008) Functional metagenomic profiling of nine biomes. Nature 452: 629632.
  • Faber, K. (2004) Biotransformations in Organic Synthesis, 6th edn. Berlin, Germany: Springer-Verlag.
  • Gibson, M., Nur-e-alam, M., Lipata, F., Oliveira, M.A., and Rohr, J. (2005) Characterization of kinetics and products of the Baeyer–Villiger oxygenase MtmOIV, the key enzyme of the biosynthetic pathway toward the natural product anticancer drug mithramycin from Streptomyces argillaceus. J Am Chem Soc 127: 1759417595.
  • Gilbert, J.A., Field, D., Huang, Y., Edwards, R., Li, W., Gilna, P., and Joint, I. (2008) Detection of large numbers of novel sequences in the metatranscriptomes of complex marine microbial communities. PLoS ONE 3: e3042.
  • Gilbert, J.A., Steele, J.A., Caporaso, J.G., Steinbrück, L., Reeder, J., Temperton, B., et al. (2012) Defining seasonal marine microbial community dynamics. ISME J 6: 298308.
  • Grogan, G. (2009) Practical Biotransformations: A Beginner's Guide. Weinheim, Germany: Wiley-VCH.
  • Heidelberg, K.B., Gilbert, J.A., and Joint, I. (2010) Marine genomics: at the interface of marine microbial ecology and biodiscovery. Microb Biotechnol 3: 531543.
  • Janes, L.E., Lowendahl, A.C., and Kazlauskas, R.D. (1998) Quantitative screening of hydrolase libraries using pH indicators: identifying active and enantioselective hydrolases. Chem Eur J 4: 23242331.
  • Joint, I., Mühling, M., and Querellou, J. (2010) Culturing marine bacteria- an essential prerequisite for biodiscovery. Microb Biotechnol 3: 564575.
  • Kirk, O., Borchert, T.V., and Fuglsang, C.C. (2002) Industrial enzyme applications. Curr Opin Biotechnol 13: 345351.
  • Kowalchuk, G.A., and Stephen, J.R. (2001) Ammonia-oxidizing bacteria: a model for molecular microbial ecology. Annu Rev Microbiol 55: 485529.
  • Lee, S.H., Malone, C., and Kemp, P.F. (1993) Use of 16S rRNA-targeted fluorescent probes to increase signal strength and measure cellular RNA from natural planktonic bacteria. Mar Ecol Prog Ser 101: 193201.
  • Linton, E.A., and Knowles, C.J. (1986) Utilization of aliphatic amides and nitriles by Nocardia rhodococcus LL100-21. J Gen Microbiol 132: 14931501.
  • Luo, H., Benner, R., Long, R.A., and Hu, J. (2009) Subcellular localization of marine bacterial alkaline phosphatase. Proc Natl Acad Sci USA 106: 2121921223.
  • Madigan, M.T., Martinko, J.M., Stahl, D., and Clark, D.P. (2008) Brock Biology of Microorganisms, 12th edn. San Francisco, USA: Pearson Benjamin-Cummings.
  • Metzler, D.E. (2001) Biochemistry: The Chemical Reactions of Living Cells, 2nd edn. San Diego, USA: Academic Press.
  • Moran, M.A., Belas, R., Schell, M.A., Gonzalez, J.M., Sun, F., Sun, S., et al. (2007) Ecological genomics of marine Roseobacters. Appl Environ Microbiol 73: 45594569.
  • Mühling, M., Woolven-Allen, J.A., Murrell, J.C., and Joint, I. (2008) Improved group-specific PCR primers for DGGE analysis of the genetic diversity of complex microbial communities. ISME J 2: 379392.
  • Muyzer, G., Teske, A., Wirsen, C.O., and Jannasch, H.W. (1995) Phylogenetic relationships of Thiomicrospira species and their identification in deep-sea hydrothermal vent samples by denaturing gradient gel electrophoresis of 16S rDNA fragments. Arch Microbiol 164: 165172.
  • Nagasawa, T., Nakamura, T., and Yamada, H. (1990) ε-Caprolactam, a new powerful inducer of the formation of Rhodococcus rhodochrous J1 nitrilase. Arch Microbiol 155: 1317.
  • Olsen, R.L., Overbo, K., and Myrnes, B. (1991) Alkaline phosphatase from the hepatopancreas of shrimp (Pandalus borealis): a dimeric enzyme with catalytically active subunits. Comp Biochem Physiol B Biochem Mol Biol 99: 755761.
  • Plisova, E.Y., Balabanova, L.A., Ivanova, E.P., Kazhemyako, V.B., Mikhailov, V.V., Agafonova, E.V., and Rasskazov, V.A. (2005) A highly active alkaline phosphatase from the marine bacterium Cobetia. Mar Biotechnol (NY) 7: 173178.
  • Raadt de, A., Klempier, N., Faber, K., and Griengl, H. (1992) Chemoselective enzymatic hydrolysis of aliphatic and alicyclic nitriles. J Chem Soc [Perkin 1] 1: 137140.
  • Reymond, J.L. (ed.) (2005) Enzyme Assays. High-Throughput Screening, Genetic Selection and Fingerprinting. Weinheim, Germany: Wiley-VCH.
  • Sharma, P., Goel, R., and Capalash, N. (2007) Bacterial laccases. World J Microbiol Biotechnol 23: 823832.
  • Sokal, R.R., and Michener, C.D. (1958) A statistical method for evaluating systematic relationships. Univ Kans Sci Bull 38: 14091438.
  • Steele, H.L., Jaeger, K.E., Daniel, R., and Streit, W.R. (2009) Advances in recovery of novel biocatalysts from metagenomes. J Mol Microbiol Biotechnol 16: 2537.
  • Streit, W.R., Daniel, R., and Jaeger, K.E. (2004) Prospecting for biocatalysts and drugs in the genomes of non-cultured microorganisms. Curr Opin Biotechnol 15: 285290.
  • Suneetha, V., and Khan, Z.A. (2011) Actinomycetes: sources for soil enzymes. In Soil Enzymology. Shukla, G. , and Varma, A. (eds). Berlin, Germany: Springer-Verlag, pp. 259269.
  • Tang, W.L., and Zhao, H. (2009) Industrial biotechnology: tools and applications. Biotechnol J 4: 17251739.
  • Trincone, A. (2010) Potential biocatalysts originating from sea environments. J Mol Catal B Enzym 66: 241256.
  • Trincone, A. (2011) Marine biocatalysts: enzymatic features and applications. Mar Drugs 9: 478499.
  • Tringe, S.G., von Mering, C., Kobayashi, A., Salamov, A.A., Chen, K., Chang, H.W., et al. (2005) Comparative metagenomics of microbial communities. Science 308: 554557.
  • Venter, J.C., Remington, K., Heidelberg, J.F., Halpern, A.L., Rusch, D., Eisen, J.A., et al. (2004) Environmental genome shotgun sequencing of the Sargasso Sea. Science 304: 6674.
  • Wagner-Döbler, I., Beil, W., Lang, S., Meiners, M., and Laatsch, H. (2002) Integrated approach to explore the potential of marine microorganisms for the production of bioactive metabolites. Adv Biochem Eng Biotechnol 74: 207238.
  • Weisburg, W.G., Barns, S.M., Pelletier, D.A., and Lane, D.J. (1991) 16S ribosomal DNA amplification for phylogenetic study. J Bacteriol 173: 697703.
  • Whittall, J. , and Sutton, P. (eds) (2009) Practical Methods for Biocatalysis and Biotransformations. Chichester, UK: John Wiley and Sons.
  • Xiao, R., Xie, L.-P., Lin, J.-Y., Li, C.-H., Chen, Q.-X., Zhou, H.-M., and Zhang, R.-Q. (2002) Purification and enzymatic characterization of alkaline phosphatase from Pinctada fucata. J Mol Catal B Enzym 17: 6574.