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FilenameFormatSizeDescription
men12222-sup-0001-AppendixS1.xlsxapplication/msexcel3078KAppendix S1. Details about targeted exons and probes.
men12222-sup-0002-AppendixS2.pdfapplication/PDF201KAppendix S2. Donnelly Sequencing Centre Custom Exome Enrichment Protocol V1.4.
men12222-sup-0003-AppendixS3.xlsxapplication/msexcel92KAppendix S3. List of 892 exons captured for at least one cichlid species with a minimum length of 500 bp where bases were called with a minimum depth of 10 and minimum mapping and base quality scores of 20.
men12222-sup-0004-AppendixS4.xlsxapplication/msexcel50KAppendix S4. List of 32 opsin exon targets captured where bases were called with a minimum depth of 10 and minimum mapping and base quality scores of 20. Subjective alignment quality assessed only for those exons that were captured for all 10 species.
men12222-sup-0005-AppendixS5-S7.pdfapplication/PDF135K

Appendix S5. Gene and species trees for analyses of 564 exon (649 549 bp) dataset (‘good’ + ‘passable’ alignments).

Appendix S6. Gene and species trees for analyses of 389 exon (443 142 bp) dataset (‘good’ alignments).

Appendix S7. Gene and species trees for analyses of 175 (206 407 bp) exon dataset (‘passable’ alignments).

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