Transcriptome resources for the perennial sunflower Helianthus maximiliani obtained from ecologically divergent populations
Version of Record online: 4 MAR 2014
© 2014 John Wiley & Sons Ltd
Molecular Ecology Resources
Volume 14, Issue 4, pages 812–819, July 2014
How to Cite
Kawakami, T., Darby, B. J. and Ungerer, M. C. (2014), Transcriptome resources for the perennial sunflower Helianthus maximiliani obtained from ecologically divergent populations. Molecular Ecology Resources, 14: 812–819. doi: 10.1111/1755-0998.12227
- Issue online: 13 JUN 2014
- Version of Record online: 4 MAR 2014
- Accepted manuscript online: 18 JAN 2014 09:08AM EST
- Manuscript Accepted: 8 JAN 2014
- Manuscript Revised: 7 JAN 2014
- Manuscript Received: 27 SEP 2013
- Integrated Genomics Facility at Kansas State University
- NSF. Grant Number: DEB- 0742993
Fig. S1 Distribution of Gene Ontology (GO) categories for biological process, cellular component and molecular function in H. maximiliani.
Fig. S2 Gene Ontology (GO) categories assigned to 164 and 104 contigs that are specific to the Manitoba and Texas populations of H. maximiliani, respectively. A) Biological process, B) cellular component and C) molecular function. Only GO terms with ≥5 contigs in at least one population are shown.
Table S1 Arabidopsis thaliana genes used as queries to search for flowering-time-related genes in H. maximiliani.
Table S2 Arabidopsis thaliana genes used as queries to search for freezing-tolerance-related genes in H. maximiliani.
Table S3 11,251 contigs of H. maximiliani with high similarity to Arabidopsis thaliana protein sequences (E-value < 1e-20).
Table S4 Blast searches (tblastx) identified 197 unique sequences of H. maximiliani transcriptome contigs (269 hits in total) with high similarity to Arabidopsis thaliana flowering-time-related genes (E-value < 1e-20).
Table S5 Blast search (tblastx) identified 89 unique sequences of H. maximiliani transcriptome contigs (100 hits in total) that have high similarity with Arabidopsis thaliana freezing-tolerance-related genes (E-value < 1e-20).
Table S6 Single-nucleotide polymorphisms identified within and between Manitoba and Texas populations of H. maximiliani and flanking regions.
Table S7 Simple sequence repeats (SSRs) identified in H. maximiliani.
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