Estimation of linkage disequilibrium and interspecific gene flow in Ficedula flycatchers by a newly developed 50k single-nucleotide polymorphism array
Version of Record online: 26 MAY 2014
© 2014 The Authors. Molecular Ecology Resources Published by John Wiley & Sons Ltd.
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Molecular Ecology Resources
Volume 14, Issue 6, pages 1248–1260, November 2014
How to Cite
Kawakami, T., Backström, N., Burri, R., Husby, A., Olason, P., Rice, A. M., Ålund, M., Qvarnström, A. and Ellegren, H. (2014), Estimation of linkage disequilibrium and interspecific gene flow in Ficedula flycatchers by a newly developed 50k single-nucleotide polymorphism array. Molecular Ecology Resources, 14: 1248–1260. doi: 10.1111/1755-0998.12270
- Issue online: 10 OCT 2014
- Version of Record online: 26 MAY 2014
- Accepted manuscript online: 30 APR 2014 09:13AM EST
- Manuscript Accepted: 25 APR 2014
- Manuscript Revised: 14 APR 2014
- Manuscript Received: 21 JAN 2014
- European Research Council. Grant Number: 249976
- Knut and Alice Wallenberg Foundation
- Swedish Research Council. Grant Number: 2010-5650
Table S1 Summary of analysis of tag SNPs for each chromosome and for all chromosomes combined (Total). No. SNPs = total number of SNPs genotyped in the population sample for each respective chromosome with minor allele frequency >10/%, No. tag SNPs = number of SNPs in the tagging panel at a particular tagging threshold (r2) that represent the entire set of SNPs for each respective chromosome (percentage of entire set within brackets).
Figure S1 Triangle plot indicating relationships between interspecific heterozygosity (HI: vertical axis) and hybrid index [S: horisonal axis from 0 (pure collared flycatcher) to 1 (pure pied flycatcher)] of 48 putative hybrid individuals and five additional F1-like hybrids identified in ‘pure’ parental species cohort by Admixture analysis.
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