Brief Report
Epiphytic cyanobacteria of the seagrass Cymodocea rotundata: diversity, diel nifH expression and nitrogenase activity
Article first published online: 30 JAN 2013
DOI: 10.1111/1758-2229.12031
© 2013 John Wiley & Sons Ltd and Society for Applied Microbiology
Issue

Environmental Microbiology Reports
Thematic Issue: Plant-Microbe Interactions
Volume 5, Issue 3, pages 367–376, June 2013
Additional Information
How to Cite
Hamisi, M., Díez, B., Lyimo, T., Ininbergs, K. and Bergman, B. (2013), Epiphytic cyanobacteria of the seagrass Cymodocea rotundata: diversity, diel nifH expression and nitrogenase activity. Environmental Microbiology Reports, 5: 367–376. doi: 10.1111/1758-2229.12031
Publication History
- Issue published online: 22 APR 2013
- Article first published online: 30 JAN 2013
- Accepted manuscript online: 10 JAN 2013 01:40AM EST
- Manuscript Revised: 31 DEC 2012
- Manuscript Accepted: 31 DEC 2012
- Manuscript Received: 2 OCT 2011
Funded by
- Swedish Sida/SAREC
- The Swedish Research Council
- The Swedish Foundation for International Cooperation in Research and Higher Education
- K. and A. Wallenberg Foundation
- Abstract
- Article
- References
- Supporting Information
- Cited By
| Filename | Format | Size | Description |
|---|---|---|---|
| emi412031-sup-0001-fS1.tif | 3652K | Fig. S1. Diel 16S rRNA gene – DGGE profiles of epiphytic cyanobacteria associated with Cymodocea rotundata. Samples were collected at eight time points during 24 h cycles. The bands marked with black dots and numbers were excised, sequenced and used for the phylogenetic reconstructions in Fig. 2 (As the same time points were used for the diversity analyses these could be regarded as biological replicates.). | |
| emi412031-sup-0002-fS2.tif | 4521K | Fig. S2. Diel nifH gene (based DNA and RNA) – DGGE profiles of epiphytic cyanobacteria associated with Cymodocea rotundata. A–D. Diel DNA-based gel patterns in 2007 and 2008; and (E–F) diel RNA-based gel patterns in 2008. Samples were collected at eight time points during 24 h cycles. The bands marked with black dots and numbers were excised, sequenced and used for the phylogenetic reconstructions in Fig. 3. | |
| emi412031-sup-0003-fS3.tif | 287K | Fig. S3. Diel NifH protein profile of epiphytes associated with the phyllosphere of Cymodocea rotundata. Total protein extracts from epiphytes collected in October 2008 were examined using SDS-PAGE and immunoblotting. The 40 kDa size ladder marker is given in Lane 1 (arrow). The molecular weight of the NifH protein was estimated to ~ 38 kDa. | |
| emi412031-sup-0004-suppl.doc | 91K | Sequences accession number in word file. |
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