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References

  • Alfaro, M.E., Santini, F., Brock, C., Alamillo, H., Dornburg, A., Rabosky, D.L., Carnevale, G. & Harmon, L.J. (2009) Nine exceptional radiations plus high turnover explain species diversity in jawed vertebrates. Proceedings of the National Academy of Sciences of the USA, 106, 1341013414.
  • Arendt, J. & Reznick, D. (2008) Convergence and parallelism reconsidered: what have we learned about the genetics of adaptation? Trends in Ecology and Evolution, 23, 2632.
  • Bartoszek, K., Pienaar, J., Mostad, P., Andersson, S. & Hansen, T.F. (2012) A phylogenetic comparative method for studying multivariate adaptation. Journal of Theoretical Biology, 314, 204215.
  • Beaulieu, J.M., Jhwueng, D.C., Boettiger, C. & O'Meara, B.C. (2012) Modeling stabilizing selection: expanding the Ornstein-Uhlenbeck model of adaptive evolution. Evolution, 66, 23692383.
  • Beuttell, K. & Losos, J.B. (1999) Ecological morphology of Caribbean anoles. Herpetological Monographs, 13, 128.
  • Blackledge, T.A. & Gillespie, R.G. (2004) Convergent evolution of behavior in an adaptive radiation of Hawaiian web-building spiders. Proceedings of the National Academy of Sciences of the USA, 101, 1622816233.
  • Boettiger, C., Coop, G. & Ralph, P. (2012) Is your phylogeny informative? Measuring the power of comparative methods. Evolution, 66, 22402251.
  • Burnham, K.P. & Anderson, D.R. (2002) Model Selection and Multimodel Inference: A Practical Information-Theoretic Approach, 2nd edn. Springer Verlag, New York, NY.
  • Butler, M.A. & King, A.A. (2004) Phylogenetic comparative analysis: a modeling approach for adaptive evolution. American Naturalist, 164, 683695.
  • Collar, D.C., Schulte, J.A. II & Losos, J.B. (2011) Evolution of extreme body size disparity in monitor lizards (Varanus). Evolution, 65, 26642680.
  • Csardi, G. & Nepusz, T. (2006) The igraph software package for complex network research. InterJournal, Complex Systems, 1695.
  • Eastman, J.M., Alfaro, M.E., Joyce, P., Hipp, A.L. & Harmon, L.J. (2011) A novel comparative method for identifying shifts in the rate of character evolution on trees. Evolution, 65, 35783589.
  • Felsenstein, J. (1988) Phylogenies and quantitative characters. Annual Review of Ecology and Systematics, 19, 445471.
  • Gillespie, R.G. (2004) Community assembly through adaptive radiation in Hawaiian spiders. Science, 303, 356359.
  • Gillespie, R.G., Croom, H.B. & Hasty, G.L. (1997) Phylogenetic relationships and adaptive shifts among major clades of Tetragnatha spiders (Araneae: Tetragnathidae) in Hawai'i. Pacific Science, 51, 380394.
  • Gillespie, R.G., Croom, H.B. & Palumbi, S.R. (1994) Multiple origins of a spider radiation in Hawaii. Proceedings of the National Academy of Sciences of the USA, 91, 22902294.
  • Hansen, T.F. (1997) Stabilizing selection and the comparative analysis of adaptation. Evolution, 51, 13411351.
  • Hansen, T.F. (2012) Adaptive landscapes and macroevolutionary dynamics. The Adaptive Landscape in Evolutionary Biology (eds. E. Svensson & R. Calsbeek), pp. 205226. Oxford University Press, Oxford, UK.
  • Harmon, L.J., Weir, J.T., Brock, C.D., Glor, R.E. & Challenger, W. (2008) GEIGER: investigating evolutionary radiations. Bioinformatics, 24, 129131.
  • Harmon, L.J., Losos, J.B., Davies, T.J., Gillespie, R.G., Gittleman, J.L., Bryan Jennings, W., Kozak, K.H., McPeek, M.A., Moreno-Roark, F., Near, T.J., Purvis, A., Ricklefs, R.E., Schluter, D., Schulte, J.A. II, Seehausen, O., Sidlauskas, B.L., Torres-Carvajal, O., Weir, J.T. & Mooers, A.Ø. (2010) Early bursts of body size and shape evolution are rare in comparative data. Evolution, 64, 23852396.
  • Harvey, P.H. & Pagel, M.D. (1991) The Comparative Method in Evolutionary Biology. Oxford University Press, Oxford, UK.
  • Hipp, A.L. & Escudero, M. (2010) MATICCE: mapping transitions in continuous character evolution. Bioinformatics, 26, 132133.
  • Kocher, T.D., Conroy, J.A., McKaye, K.R. & Stauffer, J.R. (1993) Similar morphologies of cichlid fish in Lakes Tanganyika and Malawi are due to convergence. Molecular Phylogenetics and Evolution, 2, 158165.
  • Losos, J. (2009) Lizards in an Evolutionary Tree: Ecology and Adaptive Radiation of Anoles. University of California Press, Berkeley, CA.
  • Losos, J.B. (2011) Convergence, adaptation, and constraint. Evolution, 65, 18271840.
  • Losos, J.B., Jackman, T.R., Larson, A., de Queiroz, K. & Rodríguez-Schettino, L. (1998) Contingency and determinism in replicated adaptive radiations of island lizards. Science, 279, 21152118.
  • Mahler, D.L., Revell, L.J., Glor, R.E. & Losos, J.B. (2010) Ecological opportunity and the rate of morphological evolution in the diversification of Greater Antillean anoles. Evolution, 64, 27312745.
  • Moore, B.R. & Chan, K.M.A. (2004) Detecting diversification rate variation in supertrees. Phylogenetic Supertrees: Combining Information to Reveal the Tree of Life (ed. O.R.P. Bininda-Emonds), pp. 487533. Kluwer Academic, Dordrecht, The Netherlands.
  • Paradis, E., Claude, J. & Strimmer, K. (2004) APE: analyses of phylogenetics and evolution in R language. Bioinformatics, 20, 289290.
  • R Core Team (2012) R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna, Austria, URL: http://www.R-project.org/.
  • Revell, L.J. (2009) Size-correction and principal components for interspecific comparative studies. Evolution, 63, 32583268.
  • Revell, L.J., Mahler, D.L., Peres-Neto, P.R. & Redelings, B.D. (2012) A new phylogenetic method for identifying exceptional phenotypic diversification. Evolution, 66, 135146.
  • Schluter, D. (2000) The Ecology of Adaptive Radiation. Oxford University Press, Oxford, UK.
  • Schluter, D. & Grant, P.R. (1984) Determinants of morphological patterns in communities of Darwin's finches. American Naturalist, 123, 175196.
  • Simpson, G.G. (1953) The Major Features of Evolution. Columbia University Press, New York, NY.
  • Stayton, C.T. (2008) Is convergence surprising? An examination of the frequency of convergence in simulated datasets. Journal of Theoretical Biology, 252, 114.
  • Thomas, G.H. & Freckleton, R.P. (2012) MOTMOT: models of trait macroevolution on trees. Methods in Ecology and Evolution, 3, 145151.
  • Venditti, C., Meade, A. & Pagel, M. (2011) Multiple routes to mammalian diversity. Nature, 479, 393396.
  • Williams, E. (1972) The origin of faunas. Evolution of lizard congeners in a complex island fauna: a trial analysis. Evolutionary Biology, 6, 4789.