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FilenameFormatSizeDescription
mee312114-sup-0001-FigS1.pdfapplication/PDF68KFigure S1. Entropy analysis results on ~30 million 101 nucleotide long Bacteroides reads. Bars show the Shannon entropy value for each position.
mee312114-sup-0002-FigS2.pdfapplication/PDF8726KFigure S2. Aerial map of seven sampling stations at Little Sippewissett Marsh, Massachusetts, USA.
mee312114-sup-0003-FigS3.pdfapplication/PDF19KFigure S3. LEfSe analysis results for five categories used to define the origin of samples collected from individuals live in the United States.
mee312114-sup-0004-appendix-S1.pdfapplication/PDF375K

Appendix S1. Oligotyping flowchart and an example analysis to highlight best practices.

mee312114-sup-0005-appendix-S2.pdfapplication/PDF172K

Appendix S2. Benchmarking oligotyping with a data set that contained reads from one E. coli strain.

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