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ahg12049-sup-0001-supmat.doc470K

1 Variance of the U-EGS under 1st-order Markov Model

2 Other Simulation Results

ahg12049-sup-0002-supmat.doc308K

Table S1 Power to detect disease-marker associations under different models and prevalences (Kp). The sample size is 100.

Table S2 Power to detect disease-marker associations under different models and prevalences (Kp). The sample size is 200.

Table S3 Power to detect disease-marker associations under different models and prevalences (Kp). The sample size is 1000.

Table S4 Power to detect disease-marker associations under different models and prevalences (Kp). The sample size is 2000.

Table S5 Power to detect disease-marker associations under different models and methods. The sample size is 400 and the prevalence Kp is 0.02.

Table S6 Power to detect disease-marker associations under different models and methods. The sample size is 100 and the prevalence Kp is 0.02.

Figure S1 Power for identifying disease-marker associations using U-AM and U-EGS, when sample size is 400, and prevalence Kp = 0.02.

Figure S2 Power to detect disease-marker associations using U-AM and U-EGS, when sample size is 400, and prevalence Kp = 0.002.

Figure S3 Power to identify disease-marker associations using U-AM and U-EGS, when sample size is 400, and prevalence Kp = 0.0002.

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