Environmental Microbiology

© Society for Applied Microbiology and John Wiley & Sons Ltd

Cover image for Vol. 9 Issue 1

January 2007

Volume 9, Issue 1

Pages 1–278

  1. Crystal Ball

    1. Top of page
    2. Crystal Ball
    3. Research articles
    4. Brief reports
    5. Web alert
    1. You have free access to this content
      Theory and the microbial world (page 1)

      Tom Curtis

      Article first published online: 4 JAN 2007 | DOI: 10.1111/j.1462-2920.2006.01222_1.x

    2. You have free access to this content
      The searchlight and the bucket of microbial ecology (pages 2–3)

      Nicole Dubilier

      Article first published online: 4 JAN 2007 | DOI: 10.1111/j.1462-2920.2006.01222_2.x

    3. You have free access to this content
      The human microbiome: eliminating the biomedical/environmental dichotomy in microbial ecology (pages 3–4)

      Ruth E. Ley, Rob Knight and Jeffrey I. Gordon

      Article first published online: 4 JAN 2007 | DOI: 10.1111/j.1462-2920.2006.01222_3.x

    4. You have free access to this content
      Riding giants (page 5)

      Philip Hugenholtz

      Article first published online: 4 JAN 2007 | DOI: 10.1111/j.1462-2920.2006.01222_4.x

    5. You have free access to this content
      The future of single-cell environmental microbiology (pages 6–7)

      Marcel M. M. Kuypers and Bo Barker Jørgensen

      Article first published online: 4 JAN 2007 | DOI: 10.1111/j.1462-2920.2006.01222_5.x

    6. You have free access to this content
      Single-cell genomics (page 7)

      Howard Ochman

      Article first published online: 4 JAN 2007 | DOI: 10.1111/j.1462-2920.2006.01222_6.x

    7. You have free access to this content
      Moving to a higher level of abstraction (pages 7–8)

      Ross Overbeek

      Article first published online: 4 JAN 2007 | DOI: 10.1111/j.1462-2920.2006.01222_7.x

    8. You have free access to this content
      The importance of individuals and scale: moving towards single cell microbiology (pages 8–10)

      Les Dethlefsen and David A. Relman

      Article first published online: 4 JAN 2007 | DOI: 10.1111/j.1462-2920.2006.01222_8.x

    9. You have free access to this content
      Real-time microbial ecology (page 10)

      Forest Rohwer

      Article first published online: 4 JAN 2007 | DOI: 10.1111/j.1462-2920.2006.01222_9.x

    10. You have free access to this content
      Data storm (pages 10–11)

      Marc Strous

      Article first published online: 4 JAN 2007 | DOI: 10.1111/j.1462-2920.2006.01222_10.x

  2. Research articles

    1. Top of page
    2. Crystal Ball
    3. Research articles
    4. Brief reports
    5. Web alert
    1. The effect of Photorhabdus luminescens (Enterobacteriaceae) on the survival, development, reproduction and behaviour of Caenorhabditis elegans (Nematoda: Rhabditidae) (pages 12–25)

      Mathieu Sicard, Sebastian Hering, Rebecca Schulte, Sophie Gaudriault and Hinrich Schulenburg

      Article first published online: 24 JUL 2006 | DOI: 10.1111/j.1462-2920.2006.01099.x

    2. Diversity of phototrophic bacteria in microbial mats from Arctic hot springs (Greenland) (pages 26–38)

      Guus Roeselers, Tracy B. Norris, Richard W. Castenholz, Søren Rysgaard, Ronnie N. Glud, Michael Kühl and Gerard Muyzer

      Article first published online: 3 AUG 2006 | DOI: 10.1111/j.1462-2920.2006.01103.x

    3. Kleptoplasty in an Antarctic dinoflagellate: caught in evolutionary transition? (pages 39–45)

      Rebecca J. Gast, Dawn M. Moran, Mark R. Dennett and David A. Caron

      Article first published online: 7 AUG 2006 | DOI: 10.1111/j.1462-2920.2006.01109.x

    4. Bacterial community shifts in organically perturbed sediments (pages 46–60)

      Andrew Bissett, Chris Burke, Perran L. M. Cook and John P. Bowman

      Article first published online: 29 SEP 2006 | DOI: 10.1111/j.1462-2920.2006.01110.x

    5. Unveiling fungal zooflagellates as members of freshwater picoeukaryotes: evidence from a molecular diversity study in a deep meromictic lake (pages 61–71)

      Emilie Lefèvre, Corinne Bardot, Christophe Noël, Jean-François Carrias, Eric Viscogliosi, Christian Amblard and Télesphore Sime-Ngando

      Article first published online: 5 SEP 2006 | DOI: 10.1111/j.1462-2920.2006.01111.x

    6. Assessment of anaerobic benzene degradation potential using 16S rRNA gene-targeted real-time PCR (pages 72–80)

      Marcio L. B. Da Silva and Pedro J. J. Alvarez

      Article first published online: 11 AUG 2006 | DOI: 10.1111/j.1462-2920.2005.01116.x

    7. Autotrophic CO2 fixation via the reductive tricarboxylic acid cycle in different lineages within the phylum Aquificae: evidence for two ways of citrate cleavage (pages 81–92)

      Michael Hügler, Harald Huber, Stephen J. Molyneaux, Costantino Vetriani and Stefan M. Sievert

      Article first published online: 22 AUG 2006 | DOI: 10.1111/j.1462-2920.2006.01118.x

    8. Microbial diversity and dynamics in multi- and single-compartment anaerobic bioreactors processing sulfate-rich waste streams (pages 93–106)

      Aurelio M. Briones, Becky J. Daugherty, Largus T. Angenent, Kent D. Rausch, Mike E. Tumbleson and Lutgarde Raskin

      Article first published online: 22 AUG 2006 | DOI: 10.1111/j.1462-2920.2006.01119.x

    9. Abundance, distribution and potential activity of methane oxidizing bacteria in permafrost soils from the Lena Delta, Siberia (pages 107–117)

      Susanne Liebner and Dirk Wagner

      Article first published online: 22 AUG 2006 | DOI: 10.1111/j.1462-2920.2006.01120.x

    10. Analysis of nitrite reductase (nirK and nirS) genes and cultivation reveal depauperate community of denitrifying bacteria in the Black Sea suboxic zone (pages 118–130)

      Brian B. Oakley, Christopher A. Francis, Kathryn J. Roberts, Clara A. Fuchsman, S. Srinivasan and James T. Staley

      Article first published online: 14 SEP 2006 | DOI: 10.1111/j.1462-2920.2006.01121.x

    11. Diversity and abundance of sulfate-reducing microorganisms in the sulfate and methane zones of a marine sediment, Black Sea (pages 131–142)

      Julie Leloup, Alexander Loy, Nina J. Knab, Christian Borowski, Michael Wagner and Bo Barker Jørgensen

      Article first published online: 14 SEP 2006 | DOI: 10.1111/j.1462-2920.2006.01122.x

    12. Abundance of six tetracycline resistance genes in wastewater lagoons at cattle feedlots with different antibiotic use strategies (pages 143–151)

      Nicholas Peak, Charles W. Knapp, Richard K. Yang, Margery M. Hanfelt, Marilyn S. Smith, Diana S. Aga and David W. Graham

      Article first published online: 29 AUG 2006 | DOI: 10.1111/j.1462-2920.2006.01123.x

    13. Isolation and gene quantification of heterotrophic N2-fixing bacterioplankton in the Baltic Sea (pages 152–164)

      Kjärstin H. Boström, Lasse Riemann, Michael Kühl and Åke Hagström

      Article first published online: 29 AUG 2006 | DOI: 10.1111/j.1462-2920.2006.01124.x

    14. Determining the identity and roles of oil-metabolizing marine bacteria from the Thames estuary, UK (pages 165–176)

      Boyd A. McKew, Frédéric Coulon, A. Mark Osborn, Kenneth N. Timmis and Terry J. McGenity

      Article first published online: 29 AUG 2006 | DOI: 10.1111/j.1462-2920.2006.01125.x

    15. Effects of temperature and biostimulation on oil-degrading microbial communities in temperate estuarine waters (pages 177–186)

      Frédéric Coulon, Boyd A. McKew, A. Mark Osborn, Terry J. McGenity and Kenneth N. Timmis

      Article first published online: 29 AUG 2006 | DOI: 10.1111/j.1462-2920.2006.01126.x

    16. In vitro cell growth of marine archaeal-bacterial consortia during anaerobic oxidation of methane with sulfate (pages 187–196)

      Katja Nauhaus, Melanie Albrecht, Marcus Elvert, Antje Boetius and Friedrich Widdel

      Article first published online: 14 SEP 2006 | DOI: 10.1111/j.1462-2920.2006.01127.x

    17. Comparison of chitinolytic enzymes from an alkaline, hypersaline lake and an estuary (pages 197–205)

      Gary R. LeCleir, Alison Buchan, John Maurer, Mary Ann Moran and James T. Hollibaugh

      Article first published online: 14 SEP 2006 | DOI: 10.1111/j.1462-2920.2006.01128.x

    18. Unexpected diversity in populations of the many-celled magnetotactic prokaryote (pages 206–215)

      Sheri L. Simmons and Katrina J. Edwards

      Article first published online: 21 SEP 2006 | DOI: 10.1111/j.1462-2920.2006.01129.x

    19. Biochemical prey recognition by planktonic protozoa (pages 216–222)

      Emma C. Wootton, Mikhail V. Zubkov, D. Hugh Jones, Ruth H. Jones, Claire M. Martel, Catherine A. Thornton and Emily C. Roberts

      Article first published online: 5 SEP 2006 | DOI: 10.1111/j.1462-2920.2006.01130.x

    20. Identification of acetate-utilizing Bacteria and Archaea in methanogenic profundal sediments of Lake Kinneret (Israel) by stable isotope probing of rRNA (pages 223–237)

      Julia I. K. Schwarz, Tillmann Lueders, Werner Eckert and Ralf Conrad

      Article first published online: 21 SEP 2006 | DOI: 10.1111/j.1462-2920.2006.01133.x

    21. 217 000-year-old DNA sequences of green sulfur bacteria in Mediterranean sapropels and their implications for the reconstruction of the paleoenvironment (pages 238–249)

      Marco J. L. Coolen and Jörg Overmann

      Article first published online: 14 SEP 2006 | DOI: 10.1111/j.1462-2920.2006.01134.x

      Corrected by:

      217 000-year-old DNA sequences of green sulfur bacteria in Mediterranean sapropels and their implications for the reconstruction of the paleoenvironment

      Vol. 9, Issue 4, 1099, Article first published online: 8 JAN 2007

    22. High viral infection rates in Antarctic and Arctic bacterioplankton (pages 250–255)

      Christin Säwström, Wilhelm Granéli, Johanna Laybourn-Parry and Alexandre M. Anesio

      Article first published online: 14 SEP 2006 | DOI: 10.1111/j.1462-2920.2006.01135.x

    23. THIS ARTICLE HAS BEEN RETRACTED Tn5530 from Burkholderia cepacia strain 2a encodes a chloride channel protein essential for the catabolism of 2,4-dichlorophenoxyacetic acid (pages 256–265)

      Antonio Sebastianelli and Ian J. Bruce

      Article first published online: 14 SEP 2006 | DOI: 10.1111/j.1462-2920.2006.01136.x

  3. Brief reports

    1. Top of page
    2. Crystal Ball
    3. Research articles
    4. Brief reports
    5. Web alert
    1. Rapid detection and enumeration of trh-carrying Vibrio parahaemolyticus with the alkaline phosphatase-labelled oligonucleotide probe (pages 266–270)

      Pendru Raghunath, Balakrishnan Pradeep, Indrani Karunasagar and Iddya Karunasagar

      Article first published online: 29 SEP 2006 | DOI: 10.1111/j.1462-2920.2006.01145.x

    2. Growth and mechanism of filamentous-sulfur formation by Candidatus Arcobacter sulfidicus in opposing oxygen-sulfide gradients (pages 271–276)

      Stefan M. Sievert, Elze B. A. Wieringa, Carl O. Wirsen and Craig D. Taylor

      Article first published online: 13 OCT 2006 | DOI: 10.1111/j.1462-2920.2006.01156.x

  4. Web alert

    1. Top of page
    2. Crystal Ball
    3. Research articles
    4. Brief reports
    5. Web alert
    1. History of environmental microbiology : An annotated selection of World Wide Web sites relevant to the topics in Environmental Microbiology (pages 277–278)

      Lawrence P. Wackett

      Article first published online: 4 JAN 2007 | DOI: 10.1111/j.1462-2920.2007.01221.x

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