Environmental Microbiology

© Society for Applied Microbiology and John Wiley & Sons Ltd

Cover image for Vol. 13 Issue 8

Thematic Issue: Extremophiles. Guest Editors: Ricardo Cavicchioli, Ricardo Amils, Dirk Wagner, Terry McGenity

August 2011

Volume 13, Issue 8

Pages 1903–2387

  1. Editorial

    1. Top of page
    2. Editorial
    3. Minireviews
    4. Research articles
    5. Corrigendum
    1. Life and applications of extremophiles (pages 1903–1907)

      Ricardo Cavicchioli, Ricardo Amils, Dirk Wagner and Terry McGenity

      Article first published online: 21 AUG 2011 | DOI: 10.1111/j.1462-2920.2011.02512.x

  2. Minireviews

    1. Top of page
    2. Editorial
    3. Minireviews
    4. Research articles
    5. Corrigendum
    1. Thermodynamic limits to microbial life at high salt concentrations (pages 1908–1923)

      Aharon Oren

      Article first published online: 5 NOV 2010 | DOI: 10.1111/j.1462-2920.2010.02365.x

    2. You have free access to this content
      The protein folding challenge in psychrophiles: facts and current issues (pages 1924–1933)

      Florence Piette, Caroline Struvay and Georges Feller

      Article first published online: 1 MAR 2011 | DOI: 10.1111/j.1462-2920.2011.02436.x

    3. You have free access to this content
      Proteomics of extremophiles (pages 1934–1955)

      Dominic Burg, Charmaine Ng, Lily Ting and Ricardo Cavicchioli

      Article first published online: 25 APR 2011 | DOI: 10.1111/j.1462-2920.2011.02484.x

  3. Research articles

    1. Top of page
    2. Editorial
    3. Minireviews
    4. Research articles
    5. Corrigendum
    1. Diversity of virus–host systems in hypersaline Lake Retba, Senegal (pages 1956–1972)

      Télesphore Sime-Ngando, Soizick Lucas, Agnès Robin, Kimberly Pause Tucker, Jonathan Colombet, Yvan Bettarel, Elie Desmond, Simonetta Gribaldo, Patrick Forterre, Mya Breitbart and David Prangishvili

      Article first published online: 25 AUG 2010 | DOI: 10.1111/j.1462-2920.2010.02323.x

    2. You have full text access to this OnlineOpen article
      A blueprint of ectoine metabolism from the genome of the industrial producer Halomonas elongata DSM 2581T (pages 1973–1994)

      Karin Schwibbert, Alberto Marin-Sanguino, Irina Bagyan, Gabriele Heidrich, Georg Lentzen, Harald Seitz, Markus Rampp, Stephan C. Schuster, Hans-Peter Klenk, Friedhelm Pfeiffer, Dieter Oesterhelt and Hans Jörg Kunte

      Article first published online: 16 SEP 2010 | DOI: 10.1111/j.1462-2920.2010.02336.x

    3. Evidence for syntrophic acetate oxidation coupled to hydrogenotrophic methanogenesis in the high-temperature petroleum reservoir of Yabase oil field (Japan) (pages 1995–2006)

      Daisuke Mayumi, Hanako Mochimaru, Hideyoshi Yoshioka, Susumu Sakata, Haruo Maeda, Yoshihiro Miyagawa, Masayuki Ikarashi, Mio Takeuchi and Yoichi Kamagata

      Article first published online: 23 SEP 2010 | DOI: 10.1111/j.1462-2920.2010.02338.x

    4. A mutation in dnaK causes stabilization of the heat shock sigma factor σ32, accumulation of heat shock proteins and increase in toluene-resistance in Pseudomonas putida (pages 2007–2017)

      Yuka Kobayashi, Iwao Ohtsu, Makoto Fujimura and Fumiyasu Fukumori

      Article first published online: 29 SEP 2010 | DOI: 10.1111/j.1462-2920.2010.02344.x

    5. Temperature-dependent global gene expression in the Antarctic archaeon Methanococcoides burtonii (pages 2018–2038)

      S. Campanaro, T. J. Williams, D. W. Burg, D. De Francisci, L. Treu, F. M. Lauro and R. Cavicchioli

      Article first published online: 8 NOV 2010 | DOI: 10.1111/j.1462-2920.2010.02367.x

    6. The RNA polymerase subunits E/F from the Antarctic archaeon Methanococcoides burtonii bind to specific species of mRNA (pages 2039–2055)

      Davide De Francisci, Stefano Campanaro, Geoff Kornfeld, Khawar S. Siddiqui, Timothy J. Williams, Haluk Ertan, Laura Treu, Oliver Pilak, Federico M. Lauro, Stephen J. Harrop, Paul M. G. Curmi and Ricardo Cavicchioli

      Article first published online: 25 NOV 2010 | DOI: 10.1111/j.1462-2920.2010.02385.x

    7. Diversity, biological roles and biosynthetic pathways for sugar-glycerate containing compatible solutes in bacteria and archaea (pages 2056–2077)

      Nuno Empadinhas and Milton S. da Costa

      Article first published online: 22 DEC 2010 | DOI: 10.1111/j.1462-2920.2010.02390.x

    8. Methanogenic diversity and activity in hypersaline sediments of the centre of the Napoli mud volcano, Eastern Mediterranean Sea (pages 2078–2091)

      Cassandre Sara Lazar, R. John Parkes, Barry A. Cragg, Stéphane L'Haridon and Laurent Toffin

      Article first published online: 7 MAR 2011 | DOI: 10.1111/j.1462-2920.2011.02425.x

    9. Biodiversity and geochemistry of an extremely acidic, low-temperature subterranean environment sustained by chemolithotrophy (pages 2092–2104)

      Sakurako Kimura, Christopher G. Bryan, Kevin B. Hallberg and D. Barrie Johnson

      Article first published online: 7 MAR 2011 | DOI: 10.1111/j.1462-2920.2011.02434.x

    10. Archaeal diversity along a subterranean salt core from the Salar Grande (Chile) (pages 2105–2121)

      Audrey Gramain, Guillermo Chong Díaz, Cecilia Demergasso, Tim K. Lowenstein and Terry J. McGenity

      Article first published online: 28 FEB 2011 | DOI: 10.1111/j.1462-2920.2011.02435.x

    11. Development of a genetic system for the moderately halophilic bacterium Halobacillus halophilus: generation and characterization of mutants defect in the production of the compatible solute proline (pages 2122–2131)

      Saskia Köcher, Beate Averhoff and Volker Müller

      Article first published online: 1 MAR 2011 | DOI: 10.1111/j.1462-2920.2011.02437.x

    12. An oxygen reduction chain in the hyperthermophilic anaerobe Thermotoga maritima highlights horizontal gene transfer between Thermococcales and Thermotogales (pages 2132–2145)

      Céline Le Fourn, Gaël Brasseur, Céline Brochier-Armanet, Laetitia Pieulle, Andrei Brioukhanov, Bernard Ollivier and Alain Dolla

      Article first published online: 1 MAR 2011 | DOI: 10.1111/j.1462-2920.2011.02439.x

    13. Diversity of extremophilic purple phototrophic bacteria in Soap Lake, a Central Washington (USA) Soda Lake (pages 2146–2157)

      Marie Asao, Holly C. Pinkart and Michael T. Madigan

      Article first published online: 15 MAR 2011 | DOI: 10.1111/j.1462-2920.2011.02449.x

    14. Microbial community structure of hydrothermal deposits from geochemically different vent fields along the Mid-Atlantic Ridge (pages 2158–2171)

      Gilberto E. Flores, James H. Campbell, Julie D. Kirshtein, Jennifer Meneghin, Mircea Podar, Joshua I. Steinberg, Jeffrey S. Seewald, Margaret Kingston Tivey, Mary A. Voytek, Zamin K. Yang and Anna-Louise Reysenbach

      Article first published online: 21 MAR 2011 | DOI: 10.1111/j.1462-2920.2011.02463.x

    15. Yellowstone Lake: high-energy geochemistry and rich bacterial diversity (pages 2172–2185)

      Scott Clingenpeel, Richard E. Macur, Jinjun Kan, William P. Inskeep, Dave Lovalvo, John Varley, Eric Mathur, Kenneth Nealson, Yuri Gorby, Hongchen Jiang, Toben LaFracois and Timothy R. McDermott

      Article first published online: 30 MAR 2011 | DOI: 10.1111/j.1462-2920.2011.02466.x

    16. Defining the response of a microorganism to temperatures that span its complete growth temperature range (−2°C to 28°C) using multiplex quantitative proteomics (pages 2186–2203)

      Timothy J. Williams, Federico M. Lauro, Haluk Ertan, Dominic W. Burg, Anne Poljak, Mark J. Raftery and Ricardo Cavicchioli

      Article first published online: 28 MAR 2011 | DOI: 10.1111/j.1462-2920.2011.02467.x

    17. Biological nitrogen fixation in acidic high-temperature geothermal springs in Yellowstone National Park, Wyoming (pages 2204–2215)

      Trinity L. Hamilton, Rachel K. Lange, Eric S. Boyd and John W. Peters

      Article first published online: 30 MAR 2011 | DOI: 10.1111/j.1462-2920.2011.02475.x

    18. Hydrothermal ecotones and streamer biofilm communities in the Lower Geyser Basin, Yellowstone National Park (pages 2216–2231)

      D'Arcy R Meyer-Dombard, Wesley Swingley, Jason Raymond, Jeff Havig, Everett L Shock and Roger E Summons

      Article first published online: 31 MAR 2011 | DOI: 10.1111/j.1462-2920.2011.02476.x

    19. Chaperonins from an Antarctic archaeon are predominantly monomeric: crystal structure of an open state monomer (pages 2232–2249)

      Oliver Pilak, Stephen J. Harrop, Khawar S. Siddiqui, Kevin Chong, Davide De Francisci, Dominic Burg, Timothy J. Williams, Ricardo Cavicchioli and Paul M. G. Curmi

      Article first published online: 7 APR 2011 | DOI: 10.1111/j.1462-2920.2011.02477.x

    20. Unveiling microbial life in new deep-sea hypersaline Lake Thetis. Part I: Prokaryotes and environmental settings (pages 2250–2268)

      Violetta La Cono, Francesco Smedile, Giovanni Bortoluzzi, Erika Arcadi, Giovanna Maimone, Enzo Messina, Mireno Borghini, Elvira Oliveri, Salvatore Mazzola, Stephan L'Haridon, Laurent Toffin, Lucrezia Genovese, Manuel Ferrer, Laura Giuliano, Peter N. Golyshin and Michail M. Yakimov

      Article first published online: 25 APR 2011 | DOI: 10.1111/j.1462-2920.2011.02478.x

    21. Microbial Metabolism in Ice and Brine at −5°C (pages 2269–2278)

      Corien Bakermans and Mark L. Skidmore

      Article first published online: 28 APR 2011 | DOI: 10.1111/j.1462-2920.2011.02485.x

    22. Proteome changes in the initial bacterial colonist during ecological succession in an acid mine drainage biofilm community (pages 2279–2292)

      Ryan S. Mueller, Brian D. Dill, Chongle Pan, Christopher P. Belnap, Brian C. Thomas, Nathan C. VerBerkmoes, Robert L. Hettich and Jillian F. Banfield

      Article first published online: 25 APR 2011 | DOI: 10.1111/j.1462-2920.2011.02486.x

    23. Favourable effects of eicosapentaenoic acid on the late step of the cell division in a piezophilic bacterium, Shewanella violacea DSS12, at high-hydrostatic pressures (pages 2293–2298)

      Jun Kawamoto, Takako Sato, Kaoru Nakasone, Chiaki Kato, Hisaaki Mihara, Nobuyoshi Esaki and Tatsuo Kurihara

      Article first published online: 25 APR 2011 | DOI: 10.1111/j.1462-2920.2011.02487.x

    24. Bioavailability of soil organic matter and microbial community dynamics upon permafrost thaw (pages 2299–2314)

      Marco J. L. Coolen, Jeroen van de Giessen, Elizabeth Y. Zhu and Cornelia Wuchter

      Article first published online: 9 MAY 2011 | DOI: 10.1111/j.1462-2920.2011.02489.x

    25. The pGRT1 plasmid of Pseudomonas putida DOT-T1E encodes functions relevant for survival under harsh conditions in the environment (pages 2315–2327)

      Lázaro Molina, Estrella Duque, Manuel J. Gómez, Tino Krell, Jesus Lacal, Alicia García-Puente, Vanina García, Miguel A. Matilla, Juan-Luis Ramos and Ana Segura

      Article first published online: 23 MAY 2011 | DOI: 10.1111/j.1462-2920.2011.02492.x

    26. Microbial growth on the edge of desiccation (pages 2328–2335)

      Marcus C. de Goffau, Jan Maarten van Dijl and Hermie J. M. Harmsen

      Article first published online: 9 MAY 2011 | DOI: 10.1111/j.1462-2920.2011.02496.x

    27. Methanogenesis in the sediments of Rio Tinto, an extreme acidic river (pages 2336–2341)

      José L. Sanz, Nuria Rodríguez, Emiliano E. Díaz and Ricardo Amils

      Article first published online: 23 MAY 2011 | DOI: 10.1111/j.1462-2920.2011.02504.x

    28. Isolation of obligately alkaliphilic magnetotactic bacteria from extremely alkaline environments (pages 2342–2350)

      Christopher T. Lefèvre, Richard B. Frankel, Mihály Pósfai, Tanya Prozorov and Dennis A. Bazylinski

      Article first published online: 23 MAY 2011 | DOI: 10.1111/j.1462-2920.2011.02505.x

    29. Photosynthetic performance of phototrophic biofilms in extreme acidic environments (pages 2351–2358)

      Virginia Souza-Egipsy, María Altamirano, Ricardo Amils and Angeles Aguilera

      Article first published online: 23 MAY 2011 | DOI: 10.1111/j.1462-2920.2011.02506.x

    30. Molecular evidence that deep-branching fungi are major fungal components in deep-sea methane cold-seep sediments (pages 2359–2370)

      Takahiko Nagahama, Eriko Takahashi, Yuriko Nagano, Mohamed A. Abdel-Wahab and Masayuki Miyazaki

      Article first published online: 23 MAY 2011 | DOI: 10.1111/j.1462-2920.2011.02507.x

    31. Ammonia oxidation, denitrification and dissimilatory nitrate reduction to ammonium in two US Great Basin hot springs with abundant ammonia-oxidizing archaea (pages 2371–2386)

      Jeremy A. Dodsworth, Bruce A. Hungate and Brian P. Hedlund

      Article first published online: 1 JUN 2011 | DOI: 10.1111/j.1462-2920.2011.02508.x

  4. Corrigendum

    1. Top of page
    2. Editorial
    3. Minireviews
    4. Research articles
    5. Corrigendum
    1. You have free access to this content
      Cell envelope architecture in the Chloroflexi: a shifting frontline in a phylogenetic turf war (page 2387)

      Iain C. Sutcliffe

      Article first published online: 18 JUL 2011 | DOI: 10.1111/j.1462-2920.2011.02553.x

      This article corrects:

      Cell envelope architecture in the Chloroflexi: a shifting frontline in a phylogenetic turf war

      Vol. 13, Issue 2, 279–282, Article first published online: 23 SEP 2010

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