Environmental Microbiology

Cover image for Vol. 15 Issue 5

Special Issue: Marine Microbial Ecophysiology and Metagenomics

May 2013

Volume 15, Issue 5

Pages 1239–1660

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      Environmental conditions that influence toxin biosynthesis in cyanobacteria (pages 1239–1253)

      Brett A. Neilan, Leanne A. Pearson, Julia Muenchhoff, Michelle C. Moffitt and Elke Dittmann

      Version of Record online: 20 MAR 2012 | DOI: 10.1111/j.1462-2920.2012.02729.x

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      Eukaryotic versus prokaryotic marine picoplankton ecology (pages 1254–1261)

      Ramon Massana and Ramiro Logares

      Version of Record online: 4 DEC 2012 | DOI: 10.1111/1462-2920.12043

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      Prokaryotic responses to hydrostatic pressure in the ocean – a review (pages 1262–1274)

      Christian Tamburini, Mehdi Boutrif, Marc Garel, Rita R. Colwell and Jody W. Deming

      Version of Record online: 19 FEB 2013 | DOI: 10.1111/1462-2920.12084

  2. Research articles

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      The metagenome of the marine anammox bacterium ‘Candidatus Scalindua profunda’ illustrates the versatility of this globally important nitrogen cycle bacterium (pages 1275–1289)

      Jack van de Vossenberg, Dagmar Woebken, Wouter J. Maalcke, Hans J. C. T. Wessels, Bas E. Dutilh, Boran Kartal, Eva M. Janssen-Megens, Guus Roeselers, Jia Yan, Daan Speth, Jolein Gloerich, Wim Geerts, Erwin van der Biezen, Wendy Pluk, Kees-Jan Francoijs, Lina Russ, Phyllis Lam, Stefanie A. Malfatti, Susannah Green Tringe, Suzanne C. M. Haaijer, Huub J. M. Op den Camp, Henk G. Stunnenberg, Rudi Amann, Marcel M. M. Kuypers and Mike S. M. Jetten

      Version of Record online: 9 MAY 2012 | DOI: 10.1111/j.1462-2920.2012.02774.x

    2. Clone libraries and single cell genome amplification reveal extended diversity of uncultivated magnetotactic bacteria from marine and freshwater environments (pages 1290–1301)

      Sebastian Kolinko, Gerhard Wanner, Emanuel Katzmann, Felizitas Kiemer, Bernhard M. Fuchs and Dirk Schüler

      Version of Record online: 26 OCT 2012 | DOI: 10.1111/1462-2920.12004

    3. The role of planktonic Flavobacteria in processing algal organic matter in coastal East Antarctica revealed using metagenomics and metaproteomics (pages 1302–1317)

      Timothy J. Williams, David Wilkins, Emilie Long, Flavia Evans, Mathew Z. DeMaere, Mark J. Raftery and Ricardo Cavicchioli

      Version of Record online: 6 NOV 2012 | DOI: 10.1111/1462-2920.12017

    4. Biogeographic partitioning of Southern Ocean microorganisms revealed by metagenomics (pages 1318–1333)

      David Wilkins, Federico M. Lauro, Timothy J. Williams, Matthew Z. Demaere, Mark V. Brown, Jeffrey M. Hoffman, Cynthia Andrews-Pfannkoch, Jeffrey B. Mcquaid, Martin J. Riddle, Stephen R. Rintoul and Ricardo Cavicchioli

      Version of Record online: 30 NOV 2012 | DOI: 10.1111/1462-2920.12035

    5. Complete genome, catabolic sub-proteomes and key-metabolites of Desulfobacula toluolica Tol2, a marine, aromatic compound-degrading, sulfate-reducing bacterium (pages 1334–1355)

      Lars Wöhlbrand, Jacob H. Jacob, Michael Kube, Marc Mussmann, René Jarling, Alfred Beck, Rudolf Amann, Heinz Wilkes, Richard Reinhardt and Ralf Rabus

      Version of Record online: 23 OCT 2012 | DOI: 10.1111/j.1462-2920.2012.02885.x

    6. Genomes of marine cyanopodoviruses reveal multiple origins of diversity (pages 1356–1376)

      S. J. Labrie, K. Frois-Moniz, M. S. Osburne, L. Kelly, S. E. Roggensack, M. B. Sullivan, G. Gearin, Q. Zeng, M. Fitzgerald, M. R. Henn and S. W. Chisholm

      Version of Record online: 16 JAN 2013 | DOI: 10.1111/1462-2920.12053

    7. An extensive investigation into the prevalence and the genetic and serological diversity of toxigenic Vibrio parahaemolyticus in Italian marine coastal waters (pages 1377–1386)

      D. Ottaviani, F. Leoni, E. Rocchegiani, R. Mioni, A. Costa, S. Virgilio, L. Serracca, D. Bove, C. Canonico, A. Di Cesare, L. Masini, S. Potenziani, G. Caburlotto, V. Ghidini and M. M. Lleo

      Version of Record online: 14 AUG 2012 | DOI: 10.1111/j.1462-2920.2012.02839.x

    8. The transcriptional regulator, CosR, controls compatible solute biosynthesis and transport, motility and biofilm formation in Vibrio cholerae (pages 1387–1399)

      Nicholas J. Shikuma, Kimberly R. Davis, Jiunn N. C. Fong and Fitnat H. Yildiz

      Version of Record online: 12 JUN 2012 | DOI: 10.1111/j.1462-2920.2012.02805.x

    9. Regulation of proteorhodopsin gene expression by nutrient limitation in the marine bacterium Vibrio sp. AND4 (pages 1400–1415)

      Neelam Akram, Joakim Palovaara, Jeremy Forsberg, Markus V. Lindh, Debra L. Milton, Haiwei Luo, José M. González and Jarone Pinhassi

      Version of Record online: 5 FEB 2013 | DOI: 10.1111/1462-2920.12085

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      Evaluation of methods to concentrate and purify ocean virus communities through comparative, replicated metagenomics (pages 1428–1440)

      Bonnie L. Hurwitz, Li Deng, Bonnie T. Poulos and Matthew B. Sullivan

      Version of Record online: 30 JUL 2012 | DOI: 10.1111/j.1462-2920.2012.02836.x

    11. Viral infection of Phaeocystis globosa impedes release of chitinous star-like structures: quantification using single cell approaches (pages 1441–1451)

      A. R. Sheik, C. P. D. Brussaard, G. Lavik, R. A. Foster, N. Musat, B. Adam and M. M. M. Kuypers

      Version of Record online: 1 AUG 2012 | DOI: 10.1111/j.1462-2920.2012.02838.x

    12. Marine cyanophages exhibit local and regional biogeography (pages 1452–1463)

      Marcia F. Marston, Samantha Taylor, Noel Sme, Rachel J. Parsons, Timothy J. E. Noyes and Jennifer B. H. Martiny

      Version of Record online: 28 DEC 2012 | DOI: 10.1111/1462-2920.12062

    13. Diversity of cyanobacterial biomarker genes from the stromatolites of Shark Bay, Western Australia (pages 1464–1475)

      Tamsyn J. Garby, Malcolm R. Walter, Anthony W.D. Larkum and Brett A. Neilan

      Version of Record online: 19 JUN 2012 | DOI: 10.1111/j.1462-2920.2012.02809.x

    14. Diversity and evolutionary relationships of T7-like podoviruses infecting marine cyanobacteria (pages 1476–1491)

      Naama P. Dekel-Bird, Sarit Avrani, Gazalah Sabehi, Irina Pekarsky, Marcia F. Marston, Shay Kirzner and Debbie Lindell

      Version of Record online: 5 MAR 2013 | DOI: 10.1111/1462-2920.12103

    15. Excess nitrate loads to coastal waters reduces nitrate removal efficiency: mechanism and implications for coastal eutrophication (pages 1492–1504)

      Mirko Lunau, Maren Voss, Matthew Erickson, Claudia Dziallas, Karen Casciotti and Hugh Ducklow

      Version of Record online: 9 MAY 2012 | DOI: 10.1111/j.1462-2920.2012.02773.x

    16. Chemolithoautotrophic denitrification of epsilonproteobacteria in marine pelagic redox gradients (pages 1505–1513)

      Christian G. Bruckner, Kerstin Mammitzsch, Günter Jost, Juliane Wendt, Matthias Labrenz and Klaus Jürgens

      Version of Record online: 26 SEP 2012 | DOI: 10.1111/j.1462-2920.2012.02880.x

    17. Release of dissolved carbohydrates by Emiliania huxleyi and formation of transparent exopolymer particles depend on algal life cycle and bacterial activity (pages 1514–1531)

      Nicolas Van Oostende, Tanja C. W. Moerdijk-Poortvliet, Henricus T. S. Boschker, Wim Vyverman and Koen Sabbe

      Version of Record online: 18 SEP 2012 | DOI: 10.1111/j.1462-2920.2012.02873.x

    18. Competition for inorganic carbon between oxygenic and anoxygenic phototrophs in a hypersaline microbial mat, Guerrero Negro, Mexico (pages 1532–1550)

      Niko Finke, Tori M. Hoehler, Lubos Polerecky, Benjamin Buehring and Bo Thamdrup

      Version of Record online: 24 JAN 2013 | DOI: 10.1111/1462-2920.12032

    19. In situ chemistry and microbial community compositions in five deep-sea hydrothermal fluid samples from Irina II in the Logatchev field (pages 1551–1560)

      Mirjam Perner, Giorgio Gonnella, Stephane Hourdez, Stefanie Böhnke, Stefan Kurtz and Peter Girguis

      Version of Record online: 22 NOV 2012 | DOI: 10.1111/1462-2920.12038

    20. Does microbial stoichiometry modulate eutrophication of aquatic ecosystems? (pages 1572–1579)

      A. K. Steenbergh, P. L. E. Bodelier, M. Heldal, C. P. Slomp and H. J. Laanbroek

      Version of Record online: 11 DEC 2012 | DOI: 10.1111/1462-2920.12042

    21. Impact of protist grazing on a key bacterial group for biogeochemical cycling in Baltic Sea pelagic oxic/anoxic interfaces (pages 1580–1594)

      Ruth Anderson, Claudia Wylezich, Sabine Glaubitz, Matthias Labrenz and Klaus Jürgens

      Version of Record online: 31 JAN 2013 | DOI: 10.1111/1462-2920.12078

    22. Adaptation of spherical multicellular magnetotactic prokaryotes to the geochemically variable habitat of an intertidal zone (pages 1595–1605)

      Ke Zhou, Wen-Yan Zhang, Hong-Miao Pan, Jin-Hua Li, Hai-Dong Yue, Tian Xiao and Long-Fei Wu

      Version of Record online: 1 JAN 2013 | DOI: 10.1111/1462-2920.12057

    23. Isolation and physiological characterization of psychrophilic denitrifying bacteria from permanently cold Arctic fjord sediments (Svalbard, Norway) (pages 1606–1618)

      Andy Canion, Om Prakash, Stefan J. Green, Linda Jahnke, Marcel M. M. Kuypers and Joel E. Kostka

      Version of Record online: 26 MAR 2013 | DOI: 10.1111/1462-2920.12110

    24. Chloride and organic osmolytes: a hybrid strategy to cope with elevated salinities by the moderately halophilic, chloride-dependent bacterium Halobacillus halophilus (pages 1619–1633)

      Stephan H. Saum, Friedhelm Pfeiffer, Peter Palm, Markus Rampp, Stephan C. Schuster, Volker Müller and Dieter Oesterhelt

      Version of Record online: 14 MAY 2012 | DOI: 10.1111/j.1462-2920.2012.02770.x

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      Archaeal amoA gene diversity points to distinct biogeography of ammonia-oxidizing Crenarchaeota in the ocean (pages 1647–1658)

      Eva Sintes, Kristin Bergauer, Daniele De Corte, Taichi Yokokawa and Gerhard J. Herndl

      Version of Record online: 12 JUN 2012 | DOI: 10.1111/j.1462-2920.2012.02801.x

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