INTEGRATIVE TESTING OF HOW ENVIRONMENTS FROM THE PAST TO THE PRESENT SHAPE GENETIC STRUCTURE ACROSS LANDSCAPES
Article first published online: 5 JUN 2013
© 2013 The Author(s). Evolution © 2013 The Society for the Study of Evolution.
Volume 67, Issue 12, pages 3386–3402, December 2013
How to Cite
He, Q., Edwards, D. L. and Knowles, L. L. (2013), INTEGRATIVE TESTING OF HOW ENVIRONMENTS FROM THE PAST TO THE PRESENT SHAPE GENETIC STRUCTURE ACROSS LANDSCAPES. Evolution, 67: 3386–3402. doi: 10.1111/evo.12159
- Issue published online: 2 DEC 2013
- Article first published online: 5 JUN 2013
- Accepted manuscript online: 8 MAY 2013 10:07AM EST
- Manuscript Accepted: 26 APR 2013
- Manuscript Received: 7 SEP 2012
Disclaimer: Supplementary materials have been peer-reviewed but not copyedited.
Figure S1. Root mean square error (RMSE) of parameter estimation against number of partial least squares included under four demographic models: (a) isolation-by-distance (IBD), (b) contemporary ecological niche model (cENM), and (c) dynamic ENM (dENM).
Table S1. Geographic locations of sampled individuals and their assigned population (see Fig. 1 for distributional details).
Table S2. List of nuclear loci sequenced in this study.
Table S3. Settings for NGen sequence assembler (DNASTAR) used for the 454 data set in the discovery of polymorphic loci.
Table S4. Length of each locus and sampling per populations for each locus.
Table S5. Soil properties used in the construction of soil layers for the principal component analysis analyses (for detailed description see McKenzie et al. 2000).
Table S6. Molecular indices calculated per locus and presented for each population separately (see Fig. 1 for distributional information), as well as across all populations, including heterozygosity (H) and the standard deviation (H_sd), the number of segregating sites (S), the number of haplotypes (K), and nucleotide diversity (π).
Table S7. List of summary statistics used in approximate Bayesian computation analyses.
Table S8. Pairwise FST of the six populations ordered from north to south (lower triangle) and the significance (upper triangle).
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