SEARCH

SEARCH BY CITATION

References

  • 1
    Suzuki T, Higgins PJ, Crawford DR. Control selection for RNA quantitation. Biotechniques 2000;29: 3327.
  • 2
    Bustin SA. Quantification of mRNA using real-time reverse transcription PCR (RT-PCR): trends and problems. J Mol Endocrinol 2002;29: 2339.
  • 3
    Bas A, Hammarstrom SG, Hammarstrom ML. Extrathymic TCR gene rearrangement in human small intestine: identification of new splice forms of recombination activating gene-1 mRNA with selective tissue expression. J Immunol 2003;171: 335971.
  • 4
    Fahlgren A, Hammarstrom S, Danielsson A, Hammarstrom ML. Increased expression of antimicrobial peptides and lysozyme in colonic epithelial cells of patients with ulcerative colitis. Clin Exp Immunol 2003;131: 90101.
  • 5
    Melgar S, Yeung MM, Bas A et al. Over-expression of interleukin 10 in mucosal T cells of patients with active ulcerative colitis. Clin Exp Immunol 2003;134: 12737.
  • 6
    Matrisian LM, Rautmann G, Magun BE, Breathnach R. Epidermal growth factor or serum stimulation of rat fibroblasts induces an elevation in mRNA levels for lactate dehydrogenase and other glycolytic enzymes. Nucleic Acids Res 1985;13: 71126.
  • 7
    Iovanna JL, Dusetti N, Cadenas B, Calvo EL. Changes in growth and pancreatic mRNA concentrations during postnatal development of rat pancreas. Pancreas 1990;5: 4216.
  • 8
    Kanayama S, Liddle RA. Influence of food deprivation on intestinal cholecystokinin and somatostatin. Gastroenterology 1991;100: 90915.
  • 9
    Goldsworthy SM, Goldsworthy TL, Sprankle CS, Butterworth BE. Variation in expression of genes used for normalization of Northern blots after induction of cell proliferation. Cell Prolif 1993;26: 5118.
  • 10
    Moshier JA, Cornell T, Majumdar AP. Expression of protease genes in the gastric mucosa during aging. Exp Gerontol 1993;28: 24958.
  • 11
    Hodin RA, Chamberlain SM, Meng S. Pattern of rat intestinal brush-border enzyme gene expression changes with epithelial growth state. Am J Physiol 1995;269: C38591.
  • 12
    Yamada H, Chen D, Monstein HJ, Hakanson R. Effects of fasting on the expression of gastrin, cholecystokinin, and somatostatin genes and of various housekeeping genes in the pancreas and upper digestive tract of rats. Biochem Biophys Res Commun 1997;231: 8358.
  • 13
    Foss DL, Baarsch MJ, Murtaugh MP. Regulation of hypoxanthine phosphoribosyltransferase, glyceraldehyde-3-phosphate dehydrogenase and beta-actin mRNA expression in porcine immune cells and tissues. Anim Biotechnol 1998;9: 6778.
  • 14
    Tokunaga K, Nakamura Y, Sakata K et al. Enhanced expression of a glyceraldehyde-3-phosphate dehydrogenase gene in human lung cancers. Cancer Res 1987;47: 56169.
  • 15
    Schek N, Hall BL, Finn OJ. Increased glyceraldehyde-3-phosphate dehydrogenase gene expression in human pancreatic adenocarcinoma. Cancer Res 1988;48: 63549.
  • 16
    Zhong H, Simons JW. Direct comparison of GAPDH, beta-actin, cyclophilin, and 28S rRNA as internal standards for quantifying RNA levels under hypoxia. Biochem Biophys Res Commun 1999;259: 5236.
  • 17
    Ke LD, Chen Z, Yung WK. A reliability test of standard-based quantitative PCR: exogenous vs endogenous standards. Mol Cell Probes 2000;14: 12735.
  • 18
    Hsiao LL, Dangond F, Yoshida T et al. A compendium of gene expression in normal human tissues. Physiol Genomics 2001;7: 97104.
  • 19
    Tricarico C, Pinzani P, Bianchi S et al. Quantitative real-time reverse transcription polymerase chain reaction: normalization to rRNA or single housekeeping genes is inappropriate for human tissue biopsies. Anal Biochem 2002;309: 293300.
  • 20
    Goidin D, Mamessier A, Staquet MJ, Schmitt D, Berthier-Vergnes O. Ribosomal 18S RNA prevails over glyceraldehyde-3-phosphate dehydrogenase and beta-actin genes as internal standard for quantitative comparison of mRNA levels in invasive and noninvasive human melanoma cell subpopulations. Anal Biochem 2001;295: 1721.
  • 21
    Vandesompele J, De Preter K, Pattyn F et al. Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol 2002;3[RESEARCH0034].
  • 22
    Steele BK, Meyers C, Ozbun MA. Variable expression of some “housekeeping” genes during human keratinocyte differentiation. Anal Biochem 2002;307: 3417.
  • 23
    Lundqvist C, Hammarstrom ML, Athlin L, Hammarstrom S. Isolation of functionally active intraepithelial lymphocytes and enterocytes from human small and large intestine. J Immunol Methods 1992;152: 25363.
  • 24
    Yeung MM, Melgar S, Baranov V et al. Characterisation of mucosal lymphoid aggregates in ulcerative colitis: immune cell phenotype and TCR-gammadelta expression. Gut 2000;47: 21527.
  • 25
    Lundqvist C, Melgar S, Yeung MM, Hammarstrom S, Hammarstrom ML. Intraepithelial lymphocytes in human gut have lytic potential and a cytokine profile that suggest T helper 1 and cytotoxic functions. J Immunol 1996;157: 192634.
  • 26
    Lundqvist C, Baranov V, Teglund S, Hammarstrom S, Hammarstrom ML. Cytokine profile and ultrastructure of intraepithelial gamma delta T cells in chronically inflamed human gingiva suggest a cytotoxic effector function. J Immunol 1994;153: 230212.
  • 27
    Kreuzer KA, Lass U, Landt O et al. Highly sensitive and specific fluorescence reverse transcription-PCR assay for the pseudogene-free detection of beta-actin transcripts as quantitative reference. Clin Chem 1999;45: 297300.
  • 28
    Forsberg G, Hernell O, Melgar S, Israelsson A, Hammarstrom S, Hammarstrom ML. Paradoxical coexpression of proinflammatory and down-regulatory cytokines in intestinal T cells in childhood celiac disease. Gastroenterology 2002;123: 66778.
  • 29
    Melgar S, Bas A, Hammarstrom S, Hammarstrom ML. Human small intestinal mucosa harbours a small population of cytolytically active CD8+ alphabeta T lymphocytes. Immunology 2002;106: 47685.
  • 30
    Schmittgen TD, Zakrajsek BA. Effect of experimental treatment on housekeeping gene expression: validation by real-time, quantitative RT-PCR. J Biochem Biophys Methods 2000;46: 6981.
  • 31
    Lupberger J, Kreuzer KA, Baskaynak G, Peters UR, Le Coutre P, Schmidt CA. Quantitative analysis of beta-actin, beta-2-microglobulin and porphobilinogen deaminase mRNA and their comparison as control transcripts for RT-PCR. Mol Cell Probes 2002;16: 2530.
  • 32
    Hamalainen HK, Tubman JC, Vikman S et al. Identification and validation of endogenous reference genes for expression profiling of T helper cell differentiation by quantitative real-time RT-PCR. Anal Biochem 2001;299: 6370.
  • 33
    Härtel C, Bein G, Kirchner H, Kluter H. A human whole-blood assay for analysis of T-cell function by quantification of cytokine mRNA. Scand J Immunol 1999;49: 64954.
  • 34
    Stordeur P, Poulin LF, Craciun L et al. Cytokine mRNA quantification by real-time PCR. J Immunol Methods 2002;259: 5564.