• 1
    Tancrède C. (1992) Role of human microflora in health and disease. Eur J Clin Microbiol Infect Dis 11: 10125.
  • 2
    Savage D.C. (1977) Microbial ecology of the gastrointestinal tract. Annu Rev Microbiol 31: 10733.
  • 3
    Guarner F. (2006) Enteric flora in health and disease. Digestion 73: 512.
  • 4
    Servin A.L. (2004) Antagonistic activities of lactobacilli and bifidobacteria against microbial pathogens. FEMS Microbiol Rev 28: 40540.
  • 5
    Hooper L.V. (2004) Bacterial contributions to mammalian gut development. Trends Microbiol 12: 12934.
  • 6
    Macfarlane S., Macfarlane G.T. (2006) Composition and metabolic activities of bacterial biofilms colonizing food residues in the human gut. Appl Environ Microbiol 72: 620411.
  • 7
    Camp J.G., Kanther M., Semova I., Rawls J.F. (2009) Patterns and scales in gastrointestinal microbial ecology. Gastroenterology 136: 19892002.
  • 8
    Turnbaugh P.J., Hamady M., Yatsunenko T., Cantarel B.L., Duncan A., Ley R.E., Sogin M.L., Jones W.J., Roe B.A., Affourtit J.P., Egholm M., Henrissat B., Heath A.C., Knight R., Gordon J.I. (2009) A core gut microbiome in obese and lean twins. Nature 457: 4804.
  • 9
    Saito Y., Hamanaka Y., Saito K., Takizawa S., Benno Y. (2002) Stability of species composition of fecal bifidobacteria in human subjects during fermented milk administration. Curr Microbiol 44: 36873.
  • 10
    Turnbaugh P.J, Ridaura V.K., Faith J.J., Rey F.E., Knight R., Gordon J.I. (2009) The effect of diet on the human gut microbiome: a metagenomic analysis in humanized gnotobiotic mice. Sci Transl Med 1: 6ra14.
  • 11
    Dethlefsen L., Huse S., Sogin M.L., Relman D.A. (2008) The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing. PLoS Biol 6: 238399.
  • 12
    Matsumoto M., Kakizoe K., Benno Y. (2007) Comparison of fecal microbiota and polyamine concentration in adult patients with intractable atopic dermatitis and healthy adults. Microbiol Immunol 51: 3746.
  • 13
    Nishikawa J., Kudo T., Sakata S., Benno Y., Sugiyama T. (2009) Diversity of mucosa-associated microbiota in active and inactive ulcerative colitis. Scand J Gastroenterol 44: 1806.
  • 14
    Okubo T., Ishihara N., Oura A., Serit M., Kim M., Yamamoto T., Mitsuoka T. (1992) In vivo effects of tea polyphenol intake on human intestinal microflora and metabolism. Biosci Biotechnol Biochem 56: 58891.
  • 15
    Lambert J.D., Sang S., Yang C.S. (2007) Biotransformation of green tea polyphenols and the biological activities of those metabolites. Mol Pharmacol 4: 81925.
  • 16
    Pastore R.L., Fratellone P. (2006) Potential health benefits of green tea (Camellia sinensis): a narrative review. Explore (NY) 2: 5319.
  • 17
    Cabrera C., Artacho R., Giménez R. (2006) Beneficial effects of green tea: a review. J Am Coll Nutr 25: 7999.
  • 18
    Chacko S.M., Thambi P.T., Kuttan R., Nishigaki I. (2010) Beneficial effects of green tea: a literature review. Chinese Medicine 6: 13.
  • 19
    Schneider C., Segre T. (2009) Green tea: potential health benefits. Am Fam Physician 79: 5914.
  • 20
    Tzounis X., Vulevic J., Kuhnl G.G., George T., Leonczak J., Gibson G.R., Kwik-Uribe C., Spencer J.P. (2008) Flavanol monomer-induced changes to the human faecal microflora. Br J Nutr 99: 78292.
  • 21
    Lee H.C., Jenner A.M., Low C.S., Lee Y.K. (2006) Effect of tea phenolics and their aromatic fecal bacterial metabolites on intestinal microbiota. Res Microbiol 157: 87684.
  • 22
    Nagashima K., Hisada T., Sato M., Mochizuki J. (2003) Application of new primer-enzyme combinations to terminal restriction fragment length polymorphism profiling of bacterial populations in human feces. Appl Environ Microbiol 69: 125162.
  • 23
    Nagashima K., Mochizuki J., Hisada T., Suzuki S., Shimomura K. (2006) Phylogenetic Analysis of 16S Ribosomal RNA Gene Sequences from Human Fecal Microbiota and Improved Utility of Terminal Restriction Fragment Length Polymorphism Profiling. Bioscience and Microflora 25: 99107.
  • 24
    Shyu C., Soule T., Bent S.J., Foster J.A., Forney L.J. (2007) MiCA: a web-based tool for the analysis of microbial communities based on terminal-restriction fragment length polymorphisms of 16S and 18S rRNA genes. Microb Ecol 53: 56270.
  • 25
    Matsumoto M., Sakamoto M., Hayashi H., Benno Y. (2005) Novel phylogenetic assignment database for terminal-restriction fragment length polymorphism analysis of human colonic microbiota. J Microbiol Methods 61: 30519.
  • 26
    Livak K.J., Schmittgen T.D. (2001) Analysis of relative gene expression data using real-time quantitative PCR and the 2−ΔΔCt Method. Methods 25: 4028.
  • 27
    Mitsuoka T. (1990) Bifidobacteria and their role in human health. J Ind Microbiol Biotechnol 6: 2638.
  • 28
    Picard C., Fioramonti J., Francois A., Robinson T., Neant F., Matuchansky C. (2005) Review article: bifidobacteria as probiotic agents–-physiological effects and clinical benefits. Aliment Pharmacol Ther 22: 495512.
  • 29
    Ishihara N., Chu D.C., Akachi S., Juneja L.R. (2001) Improvement of intestinal microflora balance and prevention of digestive and respiratory organ diseases in calves by green tea extracts. Livest Prod Sci 68: 21729.
  • 30
    Goto K. (1998) The influence of tea catechins on fecal flora of elderly residents in long-term care facilities. Annals of Long-Term Care 6: 438.
  • 31
    Ahn Y.J., Sakanaka S., Kim M.J., Kawamura T., Fujisawa T., Mitsuoka T. (1990) Effect of green tea extract on growth of intestinal bacteria. Microb Ecol Health Dis 3: 3358.
  • 32
    Gibson G.R., Fuller R. (2000) Aspects of in vitro and in vivo research approaches directed toward identifying probiotics and prebiotics for human use. J Nutr 130: 3915S.
  • 33
    Matsuki T., Watanabe K., Fujimoto J., Kado Y., Takada T., Matsumoto K., Tanaka R. (2004) Quantitative PCR with 16S rRNA-gene-targeted species-specific primers for analysis of human intestinal bifidobacteria. Appl Environ Microbiol 70: 16773.
  • 34
    Malinen E., Kassinen A., Rinttilä T., Palva A. (2003) Comparison of real-time PCR with SYBR Green I or 5′-nuclease assays and dot-blot hybridization with rDNA-targeted oligonucleotide probes in quantification of selected faecal bacteria. Microbiology 149: 26977.
  • 35
    Nadkarni M.A., Martin F.E., Jacques N.A., Hunter N. (2002) Determination of bacterial load by real-time PCR using a broad-range (universal) probe and primers set. Microbiology 148: 25766.
  • 36
    Matsuki T., Watanabe K., Tanaka R., Fukuda M., Oyaizu H. (1999) Distribution of bifidobacterial species in human intestinal microflora examined with 16S rRNA-gene-targeted species-specific primers. Appl Environ Microbiol 65: 450612.
  • 37
    Hopkins M.J., Sharp R., Macfarlane G.T. (2002) Variation in human intestinal microbiota with age. Dig Liver Dis 34: 128S.
  • 38
    Hopkins M.J., Macfarlane G.T. (2002) Changes in predominant bacterial populations in human faeces with age and with Clostridium difficile infection. J Med Microbiol 51: 44854.