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References

  • Baarøy V., Gjerde B., Heggberget T.G. et al. (2004) Identifisering av rømt oppdrettlaks. Utredning fra utvalg nedsatt av Fiskeridirektøren [Identification of escaped farmed salmon. Report from the Committee to the Director of Fisheries]. 55 pp (in Norwegian), available online at www.fiskeridir.no.
  • Bert T.M., Crawford C.R., Tringali M.D., Seyoum S., Galvin J.L., Higham M. & Lund C. (2007) Genetic management of hatchery-based enhancement. In: Ecological and Genetic Implications of Aquaculture Activities (Ed. by T.M.Bert), pp. 12374. Springer, Netherlands.
  • Brooker A.L., Cook D., Bentzen P., Wright J.M. & Doyle R.W. (1994) Organization of microsatellites differs between mammals and cold-water teleost fishes. Canadian Journal of Fisheries and Aquatic Sciences 51, 195966.
  • Dieringer D. & Schlötterer C. (2003) Microsatellite analyser (MSA): a platform independent analysis tool for large microsatellite data sets. Molecular Ecology Notes 3, 1679.
  • Falush D., Stephens M. & Pritchard J.K. (2003) Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies. Genetics 164, 156787.
  • Fevolden S.E. & Pogson G.H. (1997) Genetic divergence at the synatophysin (SypI) locus among Norwegian coastal cod populations and north-east Arctic populations of Atlantic cod. Journal of Fish Biology 51, 895908.
  • Frydenberg O., Møller D., Nævdal G. & Sick K. (1965) Haemoglobin polymorphism in Norwegian cod populations. Hereditas 53, 25771.
  • Genimpact (2006) Evaluation of genetic impact of aquaculture activities on native populations a European network. Project (1 November 2005–31 October 2007) under the EU framework program 6. Available at: http://genimpact.imr.no.
  • Gjerde B., Terjesen B.F., Barr Y., Lein I. & Thorland I. (2004) Genetic variation for juvenile growth and survival in Atlantic cod (Gadus morhua). Aquaculture 236, 16777.
  • Glover K.A. (2008) Genetic characterisation of farmed rainbow trout in Norway: intra- and inter-strain variation reveals potential for genetic assignment of escapees. BMC Genetics 9, 87.
  • Glover K.A., Skilbrei O.T. & Skaala Ø. (2008) Genetic assignment identifies farm of origin for Atlantic salmon Salmo salar escapees in a Norwegian fjord. ICES Journal of Marine Science 65, 91220.
  • Glover K.A., Hansen M.M. & Skaala Ø. (2009) Identifying the source of farmed escaped Atlantic salmon (Salmo salar): Bayesian clustering analysis increases accuracy of assignment. Aquaculture 290, 3746.
  • Goudet J. (2001) fstat, a program to estimate and test gene diversities and fixation indices version 2.9.3. Available at: http://www.unil.ch/izea/softwares/fstat.html.
  • Hansen M.M., Kenchington E. & Nielsen E.E. (2001) Assigning individual fish to populations using microsatellite DNA markers. Fish and Fisheries 2, 93112.
  • Herlin M., Delghandi M., Wesmajervi M., Taggart J.B., McAndrew B.J. & Penman D.J. (2008) Analysis of the parental contribution to a group of fry from a single day of spawning from a commercial Atlantic cod (Gadus morhua) breeding tank. Aquaculture 274, 21824.
  • Innes B.H. & Elliot N.G. (2006) Genetic diversity in a Tasmanian hatchery population of Atlantic salmon (Salmo salar L.) compared with its Canadian progenitor population. Aquaculture Research 37, 5639.
  • Jorde P.E., Knutsen H., Espeland S.H. & Stenseth N.C. (2007) Spatial scale of genetic structuring in coastal cod Gadus morhua and geographic extent of local populations. Marine Ecology Progress Series 343, 22937.
  • Jørstad K.E. (1986) Genetic studies connected with artificial propagation of cod (Gadus morhua L.). Aquaculture 57, 22738.
  • Jørstad K.E., Skaala Ø. & Dahle G. (1991) The development of biochemical and visible genetic markers and their potential use in evaluating interactions between wild and cultured fish populations. ICES Marine Science Symposia 192, 2005.
  • Jørstad K.E., Paulsen O.I., Nævdal G. & Thorkildsen S. (1994) Genetic studies of cod, Gadus morhua L., in Masfjord, western Norway: comparisons between the local stock and released, artificially reared cod. Aquaculture and Fisheries Management 25, 7791.
  • Jørstad K.E., Van Der Meeren T., Paulsen O.I., Thomsen T., Thorsen A. & Svåsand T. (2008) “Escapes” of eggs from farmed cod spawning in net pens: recruitment to wild stocks. Reviews in Fisheries Science 16, 28595.
  • Knutsen H., Jorde P.E., Andre C. & Stenseth N.C. (2003) Fine-scaled geographical population structuring in a highly mobile marine species: the Atlantic cod. Molecular Ecology 12, 38594.
  • Kolstad K., Thorland I., Refstie T. & Gjerde B. (2006) Genetic variation and genotype by location interaction in body weight, spinal deformity and sexual maturity in Atlantic cod (Gadus morhua) reared at different locations off Norway. Aquaculture 259, 6673.
  • Manel S., Gaggiotti O.E. & Waples R.S. (2005) Assignment methods: matching biological questions with appropriate techniques. Trends in Ecology and Evolution 20, 13642.
  • Miller K.M., Le K.D. & Beacham T.D. (2000) Development of tri- and tetranucleotide repeat microsatellite loci in Atlantic cod (Gadus morhua). Molecular Ecology 9, 2389.
  • Mjølnerød I.B., Refseth U.H., Karlsen E., Balstad T., Jakobsen A.S. & Hindar K. (1997) Genetic differences between two wild and farmed populations of Atlantic salmon (Salmo salar L.) revealed by three classes of genetic markers. Hereditas 127, 23948.
  • Nei M., Tajima F. & Tatano Y. (1983) Accuracy of estimated phylogenetic trees from molecular data. Journal of Molecular Evolution 19, 15370.
  • Nielsen E.E., Wright P.J., Hemmer-Hansen J., Poulsen N.A., Gibb I.M. & Meldrup D. (2009) Microgeographical population structure of cod Gadus morhua in the North sea and west of Scotland: the sole of sampling loci and individuals. Marine Ecology Progress Series 376, 21325.
  • Norris A.T., Bradley D.G. & Cunningham E.P. (1999) Microsatellite genetic variation between and within farmed and wild Atlantic salmon (Salmo salar) populations. Aquaculture 180, 24764.
  • O′Leary D.B., Coughlan J., Dillane E., McCarthy T.V. & Cross T. (2007) Microsatellite variation in cod Gadus morhua throughout its geographic range. Journal of Fish Biology 70, 31035.
  • O’Reilly P.T., Canino M.F., Bailey K.M. & Bentzen P. (2000) Isolation of twenty low stutter di- and tetranucleotide microsatellites for population analyses of walleye pollock and other gadoids. Journal of Fish Biology 56, 107486.
  • Pampoulie C., Ruzzante D.E., Chosson V., Jörundsdóttir T.D., Taylor L., Thorsteinsson V., Danielsdóttir A.K. & Marteinsdóttir G. (2006a) The genetic structure of Atlantic cod (Gadus morhua) around Iceland: insight from microsatellites, the Pan I locus and tagging experiments. Canadian Journal of Fisheries and Aquatic Sciences 63, 266074.
  • Pampoulie C., Jörundsdóttir T.D., Steinarsson A., Pétursdóttir G., Stafánsson M.O. & Danielsdóttir A.K. (2006b) Genetic comparison of experimental farmed strains and wild Icelandic populations of Atlantic cod (Gadus morhua L.). Aquaculture 261, 55664.
  • Piry S., Alapetite A., Cornuet J.M., Paetkau D., Baudouin L. & Estoup A. (2004) GeneClass2: a software for genetic assignment and first-generation migrant detection. Journal of Heredity 95, 5369.
  • Pritchard J.K., Stephens M. & Donnelly P. (2000) Inference of population structure using multilocus genotype data. Genetics 155, 94559.
  • Rannala B. & Mountain J.L. (1997) Detecting immigration by using multilocus genotypes. Proceedings of the National Academy of Sciences of the United States of America 94, 9197221.
  • Raymond M. & Rousset F. (1995) GENEPOP (V3.3): population genetics software for exact tests and ecumenicism. Journal of Heredity 86, 2489.
  • Ruzzante D.E., Taggart C.T., Doyle R.W. & Cook D. (2001) Stability in the historical pattern of genetic structure of Newfoundland cod (Gadus morhua) despite the catastrophic decline in population size from 1964 to 1994. Conservation Genetics 2, 25769.
  • Sarvas T.H. & Fevolden S.E. (2005) The ScnDNA Locus Pan I reveals concurrent presence of different populations of Atlantic cod (Gadus morhua) within a single fjord. Fisheries Research 76, 30716.
  • Skaala Ø., Høyheim B., Glover K.A. & Dahle G. (2004) Microsatellite analysis in domesticated and wild Atlantic salmon (Salmo salar L.): allelic diversity and identification of individuals. Aquaculture 240, 13143.
  • Sneath P.H.A. & Sokal R.R. (1973) Numerical Taxonomy: The Principles and Practice of Numerical Classification. Freeman, San Francisco, 573 pp.
  • Stenvik J., Wesmajervi M.S., Damsgård B. & Delghandi M. (2006) Genotyping of pantophysin I (PanI) of Atlantic cod (Gadus morhua L.) by allele-specific PCR. Molecular Ecology Notes 6, 2725.
  • Takezaki N., Rzhetsky A. & Nei M. (2004) Phylogenetic test of the molecular clock and linearized trees. Molecular Biology and Evolution 12, 82333.
  • Tamura K., Dudley J., Nei M. & Kumar S. (2007) mega4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Molecular Biology and Evolution 4, 15969.
  • Tanaguchi N.. (2004) Broodstock management for stock enhancement programs of marine fish with assistance of DNA markers: a review. In: Proceedings of Second International Symposium on Stock Enhancement and Sea Ranching (Ed. by K.Leber, S.Kitada, H.L.Blankenship & T.Svåsand), pp. 32938. Blackwell Science Ltd., Oxford.
  • Wennevik V., Jørstad K.E., Dahle G. & Fevolden S.E. (2008) Mixed stock analysis and the power of different classes of molecular markers in discriminating coastal and oceanic Atlantic cod (Gadus morhua L.) on the Lofoten spawning grounds, Northern Norway. Hydrobiologica 606, 725.
  • Westgaard J.I. & Fevolden S.E. (2007) Atlantic cod (Gadus morhua L.) in inner and outer coastal zones of northern Norway display divergent genetic signature at non-neutral loci. Fisheries Research 85, 30615.
  • Withler R.R., Supernault K.J. & Miller K.M. (2005) Genetic variation within and among domesticated Atlantic salmon broodstocks in British Columbia. Animal Genetics 36, 4350.