Expression profiling of genes related to asthma exacerbations
Article first published online: 22 JAN 2009
© 2009 Blackwell Publishing Ltd
Clinical & Experimental Allergy
Volume 39, Issue 2, pages 213–221, February 2009
How to Cite
Aoki, T., Matsumoto, Y., Hirata, K., Ochiai, K., Okada, M., Ichikawa, K., Shibasaki, M., Arinami, T., Sumazaki, R. and Noguchi, E. (2009), Expression profiling of genes related to asthma exacerbations. Clinical & Experimental Allergy, 39: 213–221. doi: 10.1111/j.1365-2222.2008.03186.x
- Issue published online: 22 JAN 2009
- Article first published online: 22 JAN 2009
- Submitted 25 July 2007; revised 31 October 2008; accepted 3 November 2008
Fig. S1.Results for simulated data using smar in R (http://www-stat.stanford.edu/~tibs/SAM/). Each panel shows the estimated FDR and false negative rate (FNR) (solid red and green curves) as well as the 10th and 90th percentiles with the sample size of 24 (12 vs. 12). A horizontal line is drawn at 0.05. The quantity on the horizontal axis| number of genes| refers to both the hypothesized number of truly non-null genes, and the number of genes called significant.
Figs S2–S5. Gene networks associated with asthma exacerbation. This network was generated with Ingenuity Pathway Analysis. Gene products are represented as node and biologic relations between two nodes are indicated by a line. Solid and shaded lines indicate direct and indirect interactions, respectively.
Table S1. Asthma exacerbation related genes
Table S2.P-values of random sampling of six AE and six SA samples
Table S3. Normalized expression values (log transformed) in each sample
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