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References

  • Armstrong, K. & Ball, S.L. (2005) DNA barcodes for biosecurity: invasive species identification. Philosophical Transactions of the Royal Society of London B Biology Sciences, 360, 18131823.
  • Ball, S.L., Hebert, P.D.N., Burian, S.K. & Webb, J.M. (2005) Biological identifications of mayflies (Ephemeroptera) using DNA barcodes. Journal of the North American Benthological Society, 24, 508524.
  • Catts, E.P. (1992) Problems in estimating the postmortem interval in death investigations. Journal of Agricultural Entomology, 9, 245255.
  • Clary, D.O. & Wolstenholme, D.R. (1985) The mitochondrial DNA molecule of Drosophila yakuba: nucleotide sequence, gene organization and genetic code. Journal of Molecular Evolution, 22, 252271.
  • DeSalle, R., Egan, M.G. & Siddall, M. (2005) The unholy trinity: taxonomy, species delimitation and DNA barcoding. Philosophical Transactions of the Royal Society of London B Biology Sciences, 360, 190516.
  • Folmer, O., Black, M., Hoeh, W., Lutz, R. & Vrijenhoek, R. (1994) DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Molecular Marine Biology and Biotechnology, 3, 294299.
  • Funk, D.J. & Omland, K.E. (2003) Species-level paraphyly and polyphyly: frequency, causes and consequences, with insights from animal mitochondrial DNA. Annual Review of Ecology, Evolution, and Systematics, 34, 397423.
  • Gu, X., Fu, Y.-X. & Li, W.-H. (1995) Maximum likelihood estimation of the heterogeneity of substitution rate among nucleotide sites. Molecular Biology and Evolution, 12, 546557.
  • Hajibabaei, M., Janzen, D.H., Burns, J.M., Hallwachs, W. & Hebert, P.D.N. (2006) DNA barcodes distinguish species of tropical Lepidoptera. Proceedings of the National Academy of Sciences of the United States of America, 103, 968971.
  • Hall, T.A. (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series, 41, 9598.
  • Hall, M. & Wall, R. (1995) Myiasis of humans and domestic animals. Advances in Parasitology, 35, 258334.
  • Hebert, P.D.N., Cywinska, A., Ball, S.L. & DeWaard, J.R. (2003) Biological identifications through DNA barcodes. Proceedings of the Royal Society of London B Biology Sciences, 270, 313322.
  • Hebert, P.D.N. & Gregory, T.R. (2005) The promise of DNA barcoding for taxonomy. Systematic Biology, 54, 852859.
  • Hebert, P.D.N., Penton, E.H., Burns, J.M., Janzen, D.H. & Hallwachs, W. (2004a) Ten species in one: DNA barcoding reveals cryptic species in the neotropical skipper butterfly Astraptes fulgerator. Proceedings of the National Academy of Sciences of the United States of America, 101, 1481214817.
  • Hebert, P.D.N., Stoeckle, M.Y., Zemlak, T.S. & Francis, C.M. (2004b) Identification of birds through DNA barcodes. Public Library of Science Biology, 2, 16571663.
  • Hogg, I.D. & Hebert, P.D.N. (2004) Biological identifications of springtails (Hexapoda: Collembola) from the Canadian Arctic, using mitochondrial DNA barcodes. Canadian Journal of Zoology, 82, 749754.
  • Huelsenbeck, J.P. & Ronquist, F.R. (2001) MRBAYES: Bayesian inference of phylogeny. Biometrics, 17, 754.
  • Kimura, M. (1980) A simple model for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution, 16, 111120.
  • Levot, G. (2003) Insect fauna used to estimate the postmortem interval of deceased persons. General and Applied Entomology, 32, 3139.
  • Maldonado, M.A. & Centeno, N. (2003) Quantifying the potential pathogens transmission of the blowflies (Diptera: Calliphoridae). Memorias do Instituto Oswaldo Cruz, 98, 213216.
  • Matz, M.V. & Nielsen, R. (2005) A likelihood ratio test for species membership based on DNA sequence data. Philosophical Transactions of the Royal Society of London B Biology Sciences, 360, 196974.
  • Meyer, C.F. & Paulay, G. (2005) DNA barcoding: error rates based on comprehensive sampling. Public Library of Science Biology, 3, 422.
  • Nylander, J.A.A. (2004) MrModeltest2.2. [Program distributed by the author.] Evolutionary Biology Centre, Uppsala University, Uppsala.
  • Ratcliffe, S.T., Webb, D.W., Weinzievr, R.A. & Robertson, H.M. (2003) PCR-RFLP identification of Diptera (Calliphoridae, Muscidae and Sarcophagidae) – a generally applicable method. Journal of Forensic Sciences, 48, 783785.
  • Ratnasingham, S. & Hebert, P.D.N. (2006) Barcode of Life Data System (BOLD) Management and Analysis System. http://www.boldsystems.org. [10 March 2006]
  • Remigio, E. & Hebert, P.D.N. (2003) Testing the utility of partial COI sequences for phylogenetic estimates of gastropod relationships. Molecular Phylogenetics and Evolution, 29, 641647.
  • Saitou, N. & Nei, M. (1987) The neighbour-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution, 4, 406425.
  • Smith, M.A., Woodley, N.E., Janzen, D.H., Hallwachs, W. & Hebert, P.D.N. (2006) DNA barcodes reveal cryptic host-specificity within the presumed polyphagous members of a genus of parasitoid flies (Diptera: Tachinidae). Proceedings of the National Academy of Sciences of the United States of America, 103, 36573662.
  • Stevens, J.R. & Wall, R. (2001) Genetic relationships between blowflies (Calliphoridae) of forensic importance. Forensic Science International, 120, 116123.
  • Sullivan, J. & Joyce, P. (2005) Model selection in phylogenetics. Annual Review of Ecology, Evolution, and Systematics, 36, 455466.
  • Sunnucks, P. & Hales, D.F. (1996) Numerous transposed sequences of mitochondrial cytochrome oxidase I–II in aphids of the genus Sitobion (Hempitera: Aphididae). Molecular Biology and Evolution, 13, 510524.
  • Swofford, D.L. (2001) PAUP*. Phylogenetic Analysis Using Parsimony (*and Other Methods). Sinauer Associates, Inc., Sunderland, MA.
  • Tautz, D., Arctander, P., Minelli, A., Thomas, R.H. & Vogler, A.P. (2003) A plea for DNA taxonomy. Trends in Ecology and Evolution, 18, 7074.
  • Tavaré, S. (1986) Some probabilistic and statistical problems in the analysis of DNA sequences. Lectures on Mathematics in the Life Sciences, 17, 5786.
  • Thompson, J., Higgins, D. & Gibson, T. (1994) CLUSTAL W: improving the sensitivity of the progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice. Nucleic Acids Research, 22, 46734680.
  • Waddell, P.J. & Penny, D. (1996) Evolutionary trees of apes and humans from DNA sequences. Handbook of Human Symbolic Evolution (ed. by A.J.Locke and C.R.Peters), pp. 5373. Blackwell Publishing, Oxford.
  • Wallman, J.F. (2001a) A key to the adults of species of blowflies in southern Australia known or suspected to breed in carrion. Medical and Veterinary Entomology, 15, 433437.
  • Wallman, J.F. (2001b) Third-instar larvae of common carrion-breeding blowflies of the genus Calliphora (Diptera: Calliphoridae) in South Australia. Invertebrate Taxonomy, 15, 3751.
  • Wallman, J.F. & Donnellan, S.C. (2001) The utility of mitochondrial DNA sequences for the identification of forensically important blowflies (Diptera: Calliphoridae) in southeastern Australia. Forensic Science International, 120, 6067.
  • Wallman, J.F., Leys, R. & Hogendoorn, K. (2005) Molecular systematics of Australian carrion-breeding blowflies (Diptera: Calliphoridae) based on mitochondrial DNA. Invertebrate Systematics, 19, 115.
  • Ward, R.D., Zemlak, T.S., Innes, B.H., Last, P.R. & Hebert, P.D.N. (2005) DNA barcoding Australia’s fish species. Philosophical Transactions of the Royal Society of London B Biology Sciences, 360, 18471857.
  • Wells, J.D. & Kurahashi, H. (1996) A new species of Chrysomya (Diptera: Calliphoridae) from Sulawesi, Indonesia, with a key to the Oriental, Australasian and Oceanian species. Medical Entomology and Zoology, 47, 131138.
  • Wells, J.D. & LaMotte, L.R. (2001) Estimating the postmortem interval. Forensic Entomology: the Utility of Arthropods in Legal Investigations, (ed. by J.H.Byrd and J.L.Castner), pp. 259281. CRC Press, Boca Raton, FL.
  • Wells, J.D. & Sperling, F.A.H. (2001) DNA-based identification of forensically important Chrysomyinae (Diptera: Calliphoridae). Forensic Science International, 120, 110115.
  • Wells, J.D., Lunt, N. & Villet, M.H. (2004) Recent African derivation of Chrysoma putoria from Ch. chloropyga and mitochondrial DNA paraphyly of cytochrome oxidase subunit one in blowflies of forensic importance. Medical and Veterinary Entomology, 18, 445448.
  • Wheeler, Q.D. (2005) Losing the plot: DNA ‘barcodes’ and taxonomy. Cladistics, 21, 405407.
  • Whelan, S., Liò, P. & Goldman, N. (2001) Molecular phylogenetics: state-of-the-art methods for looking into the past. Trends in Genetics, 17, 262272.
  • Yang, Z. (1994) Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods. Journal of Molecular Evolution, 39, 306314.
  • Zhang, D.-X. & Hewitt, G.M. (1996) Nuclear integrations: challenges for mitochondrial DNA markers. Trends in Ecology and Evolution, 11, 247251.