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Fig. S1 Partial sequence of the mitochondrial control region of Pacific Ocean common murre haplotype 01. Conserved sequence blocks are in capitals. Sequence begins 141 bp from the beginning of the control region (Moum and Johansen 1992). Asterisks mark the beginnings and ends of the three Domains, and slashes mark the beginnings and ends of the two fragments that were amplified (sequence is not continuous between these fragments). X represents a 28-bp insertion present in a single individual (5′-TGTAATGGGGTAAAGACATGGCCCTCCA-3′). Variable sites are in bold. Dashes indicate insertion or deletion sites.

Fig. S2 Sequences of the most common alleles for four nuclear introns for common murres. Variable sites are highlighted in bold.

Table S1 Intron primers surveyed and PCR annealing temperatures for Pacific common murres

Table S2 Table of variable sites between common murre control region haplotypes. Dots indicate identity to Pacific Ocean haplotype 01. Indels are indicated by a dash and X represents a 28-bp insertion in haplotype 27

Table S3 Frequencies of alleles at four microsatellite and four intron loci for common murres and estimates of allelic richness (R), and observed (HO) and expected (HE) heterozygosities at each locus

Table S4 Distribution and frequency of haplotypes

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Please note: Wiley Blackwell is not responsible for the content or functionality of any supporting information supplied by the authors. Any queries (other than missing content) should be directed to the corresponding author for the article.